Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.4□□□□□ -0.26
CDC34P49427 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.4□□□□□ -0.26
CDC34P49427 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.4□□□□□ -0.26
CDC34P49427 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC34P49427 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC34P49427 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC34P49427 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.4□□□□□ -0.26
CDC34P49427 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CDC34P49427 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC34P49427 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC34P49427 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC34P49427 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CDC34P49427 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC34P49427 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC34P49427 Telomerase-vert.1-201ENST00000363312 438 ntBASIC13.4□□□□□ -0.26
CDC34P49427 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC34P49427 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC34P49427 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC13.4□□□□□ -0.26
CDC34P49427 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CDC34P49427 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC13.4□□□□□ -0.26
CDC34P49427 AC012618.2-201ENST00000428058 849 ntBASIC13.4□□□□□ -0.26
CDC34P49427 KRT18P48-201ENST00000434763 852 ntBASIC13.4□□□□□ -0.26
CDC34P49427 MTCL1P1-201ENST00000446207 792 ntBASIC13.4□□□□□ -0.26
CDC34P49427 RBM17P1-201ENST00000453646 1190 ntBASIC13.4□□□□□ -0.26
CDC34P49427 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC13.4□□□□□ -0.26
CDC34P49427 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC13.4□□□□□ -0.26
CDC34P49427 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC13.4□□□□□ -0.26
CDC34P49427 AL049637.2-201ENST00000641778 930 ntBASIC13.4□□□□□ -0.26
CDC34P49427 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC34P49427 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC34P49427 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CDC34P49427 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.4□□□□□ -0.26
CDC34P49427 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC34P49427 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CDC34P49427 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CDC34P49427 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CDC34P49427 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CDC34P49427 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.4□□□□□ -0.26
CDC34P49427 GPR89P-201ENST00000407924 1495 ntBASIC13.4□□□□□ -0.26
CDC34P49427 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CDC34P49427 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.4□□□□□ -0.26
CDC34P49427 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.4□□□□□ -0.26
CDC34P49427 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC34P49427 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC34P49427 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CDC34P49427 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CDC34P49427 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC34P49427 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
CDC34P49427 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
CDC34P49427 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CDC34P49427 AL161772.1-201ENST00000610494 4412 ntBASIC13.4□□□□□ -0.27
CDC34P49427 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
CDC34P49427 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.39□□□□□ -0.27
CDC34P49427 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC34P49427 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
CDC34P49427 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC34P49427 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC34P49427 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC34P49427 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.39□□□□□ -0.27
CDC34P49427 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC34P49427 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC34P49427 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC34P49427 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.39□□□□□ -0.27
CDC34P49427 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC34P49427 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC34P49427 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC34P49427 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC34P49427 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC34P49427 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDC34P49427 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC13.39□□□□□ -0.27
CDC34P49427 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC34P49427 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CDC34P49427 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDC34P49427 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CDC34P49427 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC13.39□□□□□ -0.27
CDC34P49427 AC034232.1-201ENST00000506026 1064 ntBASIC13.39□□□□□ -0.27
CDC34P49427 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC13.39□□□□□ -0.27
CDC34P49427 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC13.39□□□□□ -0.27
CDC34P49427 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC13.39□□□□□ -0.27
CDC34P49427 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC13.39□□□□□ -0.27
CDC34P49427 FITM1-202ENST00000559294 800 ntBASIC13.39□□□□□ -0.27
CDC34P49427 EMC9-206ENST00000560403 872 ntTSL 2 BASIC13.39□□□□□ -0.27
CDC34P49427 AP003071.4-201ENST00000562276 1284 ntBASIC13.39□□□□□ -0.27
CDC34P49427 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC13.39□□□□□ -0.27
CDC34P49427 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.39□□□□□ -0.27
CDC34P49427 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC13.39□□□□□ -0.27
CDC34P49427 ANKRD20A8P-203ENST00000641373 517 ntBASIC13.39□□□□□ -0.27
CDC34P49427 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDC34P49427 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC34P49427 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC34P49427 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDC34P49427 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CDC34P49427 ME2P1-201ENST00000426028 1970 ntBASIC13.39□□□□□ -0.27
CDC34P49427 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC34P49427 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC34P49427 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.39□□□□□ -0.27
CDC34P49427 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC34P49427 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDC34P49427 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDC34P49427 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms