Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEDD4P46934 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
NEDD4P46934 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
NEDD4P46934 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEDD4P46934 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEDD4P46934 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NEDD4P46934 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NEDD4P46934 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NEDD4P46934 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.83■□□□□ 0.77
NEDD4P46934 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NEDD4P46934 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NEDD4P46934 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.83■□□□□ 0.77
NEDD4P46934 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NEDD4P46934 MCCD1P2-201ENST00000423228 335 ntBASIC19.83■□□□□ 0.77
NEDD4P46934 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NEDD4P46934 AC074386.1-202ENST00000463561 864 ntBASIC19.83■□□□□ 0.77
NEDD4P46934 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NEDD4P46934 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.83■□□□□ 0.77
NEDD4P46934 AL078644.1-201ENST00000609881 752 ntBASIC19.83■□□□□ 0.77
NEDD4P46934 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NEDD4P46934 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
NEDD4P46934 AC092171.3-201ENST00000610122 2651 ntBASIC19.83■□□□□ 0.77
NEDD4P46934 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NEDD4P46934 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.83■□□□□ 0.77
NEDD4P46934 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NEDD4P46934 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NEDD4P46934 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NEDD4P46934 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NEDD4P46934 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
NEDD4P46934 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.83■□□□□ 0.76
NEDD4P46934 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.83■□□□□ 0.76
NEDD4P46934 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
NEDD4P46934 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NEDD4P46934 UBALD1-205ENST00000590891 2641 ntBASIC19.83■□□□□ 0.76
NEDD4P46934 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.83■□□□□ 0.76
NEDD4P46934 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
NEDD4P46934 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NEDD4P46934 BCL2-203ENST00000589955 5011 ntBASIC19.83■□□□□ 0.76
NEDD4P46934 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.83■□□□□ 0.76
NEDD4P46934 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NEDD4P46934 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NEDD4P46934 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.82■□□□□ 0.76
NEDD4P46934 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.82■□□□□ 0.76
NEDD4P46934 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NEDD4P46934 RNU1-129P-201ENST00000384064 167 ntBASIC19.82■□□□□ 0.76
NEDD4P46934 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.82■□□□□ 0.76
NEDD4P46934 U1.21-201ENST00000580816 167 ntBASIC19.82■□□□□ 0.76
NEDD4P46934 AC010327.4-202ENST00000591484 748 ntBASIC19.82■□□□□ 0.76
NEDD4P46934 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
NEDD4P46934 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.82■□□□□ 0.76
NEDD4P46934 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
NEDD4P46934 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NEDD4P46934 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.82■□□□□ 0.76
NEDD4P46934 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
NEDD4P46934 TNRC18P3-201ENST00000441896 2691 ntBASIC19.82■□□□□ 0.76
NEDD4P46934 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NEDD4P46934 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
NEDD4P46934 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NEDD4P46934 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.82■□□□□ 0.76
NEDD4P46934 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
NEDD4P46934 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NEDD4P46934 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NEDD4P46934 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
NEDD4P46934 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NEDD4P46934 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NEDD4P46934 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.81■□□□□ 0.76
NEDD4P46934 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
NEDD4P46934 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.81■□□□□ 0.76
NEDD4P46934 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NEDD4P46934 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.81■□□□□ 0.76
NEDD4P46934 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.81■□□□□ 0.76
NEDD4P46934 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.81■□□□□ 0.76
NEDD4P46934 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.81■□□□□ 0.76
NEDD4P46934 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.81■□□□□ 0.76
NEDD4P46934 AP002472.1-201ENST00000577490 586 ntBASIC19.81■□□□□ 0.76
NEDD4P46934 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.81■□□□□ 0.76
NEDD4P46934 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
NEDD4P46934 AC091812.2-201ENST00000619081 385 ntBASIC19.81■□□□□ 0.76
NEDD4P46934 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.81■□□□□ 0.76
NEDD4P46934 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NEDD4P46934 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NEDD4P46934 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
NEDD4P46934 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NEDD4P46934 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
NEDD4P46934 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.81■□□□□ 0.76
NEDD4P46934 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.81■□□□□ 0.76
NEDD4P46934 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
NEDD4P46934 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NEDD4P46934 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NEDD4P46934 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NEDD4P46934 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
NEDD4P46934 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.81■□□□□ 0.76
NEDD4P46934 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.81■□□□□ 0.76
NEDD4P46934 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NEDD4P46934 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NEDD4P46934 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.81■□□□□ 0.76
NEDD4P46934 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NEDD4P46934 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
NEDD4P46934 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NEDD4P46934 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms