Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRPHP41219 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRPHP41219 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PRPHP41219 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRPHP41219 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRPHP41219 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.07■□□□□ 0.64
PRPHP41219 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.07■□□□□ 0.64
PRPHP41219 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.07■□□□□ 0.64
PRPHP41219 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PRPHP41219 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRPHP41219 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.07■□□□□ 0.64
PRPHP41219 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PRPHP41219 UNC93B6-202ENST00000528242 690 ntBASIC19.07■□□□□ 0.64
PRPHP41219 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
PRPHP41219 AC131009.4-201ENST00000624048 1740 ntBASIC19.07■□□□□ 0.64
PRPHP41219 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRPHP41219 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PRPHP41219 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PRPHP41219 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRPHP41219 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
PRPHP41219 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PRPHP41219 AC006538.1-201ENST00000567905 1585 ntBASIC19.06■□□□□ 0.64
PRPHP41219 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
PRPHP41219 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRPHP41219 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRPHP41219 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.06■□□□□ 0.64
PRPHP41219 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRPHP41219 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.06■□□□□ 0.64
PRPHP41219 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRPHP41219 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRPHP41219 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRPHP41219 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRPHP41219 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRPHP41219 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.06■□□□□ 0.64
PRPHP41219 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRPHP41219 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PRPHP41219 PMS2P1-201ENST00000431037 1228 ntBASIC19.06■□□□□ 0.64
PRPHP41219 AC009947.1-201ENST00000444350 727 ntBASIC19.06■□□□□ 0.64
PRPHP41219 FDX1P1-201ENST00000449115 551 ntBASIC19.06■□□□□ 0.64
PRPHP41219 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRPHP41219 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.06■□□□□ 0.64
PRPHP41219 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.06■□□□□ 0.64
PRPHP41219 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.06■□□□□ 0.64
PRPHP41219 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.06■□□□□ 0.64
PRPHP41219 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
PRPHP41219 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRPHP41219 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRPHP41219 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.06■□□□□ 0.64
PRPHP41219 SNX33P1-201ENST00000592116 1762 ntBASIC19.06■□□□□ 0.64
PRPHP41219 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PRPHP41219 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.06■□□□□ 0.64
PRPHP41219 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRPHP41219 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRPHP41219 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.06■□□□□ 0.64
PRPHP41219 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRPHP41219 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.06■□□□□ 0.64
PRPHP41219 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.06■□□□□ 0.64
PRPHP41219 AL139384.1-201ENST00000612143 3047 ntBASIC19.06■□□□□ 0.64
PRPHP41219 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRPHP41219 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
PRPHP41219 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRPHP41219 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.05■□□□□ 0.64
PRPHP41219 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRPHP41219 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PRPHP41219 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRPHP41219 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.05■□□□□ 0.64
PRPHP41219 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRPHP41219 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.05■□□□□ 0.64
PRPHP41219 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRPHP41219 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PRPHP41219 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.05■□□□□ 0.64
PRPHP41219 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRPHP41219 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.05■□□□□ 0.64
PRPHP41219 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
PRPHP41219 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PRPHP41219 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRPHP41219 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRPHP41219 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRPHP41219 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.05■□□□□ 0.64
PRPHP41219 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.05■□□□□ 0.64
PRPHP41219 RNA5SP415-201ENST00000517246 115 ntBASIC19.05■□□□□ 0.64
PRPHP41219 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.05■□□□□ 0.64
PRPHP41219 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.05■□□□□ 0.64
PRPHP41219 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
PRPHP41219 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRPHP41219 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.05■□□□□ 0.64
PRPHP41219 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PRPHP41219 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.05■□□□□ 0.64
PRPHP41219 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
PRPHP41219 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.05■□□□□ 0.64
PRPHP41219 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRPHP41219 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRPHP41219 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRPHP41219 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRPHP41219 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRPHP41219 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRPHP41219 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRPHP41219 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.05■□□□□ 0.64
PRPHP41219 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRPHP41219 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms