Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC21.22■□□□□ 0.99
COL15A1P39059 AC027307.3-201ENST00000594262 1100 ntBASIC21.22■□□□□ 0.99
COL15A1P39059 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL15A1P39059 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL15A1P39059 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC21.21■□□□□ 0.99
COL15A1P39059 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL15A1P39059 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL15A1P39059 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
COL15A1P39059 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC21.21■□□□□ 0.99
COL15A1P39059 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC21.21■□□□□ 0.99
COL15A1P39059 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL15A1P39059 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL15A1P39059 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.21■□□□□ 0.99
COL15A1P39059 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL15A1P39059 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL15A1P39059 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC21.21■□□□□ 0.99
COL15A1P39059 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL15A1P39059 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
COL15A1P39059 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL15A1P39059 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL15A1P39059 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL15A1P39059 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
COL15A1P39059 AC007274.1-201ENST00000439805 662 ntBASIC21.21■□□□□ 0.99
COL15A1P39059 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC21.21■□□□□ 0.99
COL15A1P39059 HLA-V-204ENST00000476601 1289 ntBASIC21.21■□□□□ 0.99
COL15A1P39059 KRT18P34-201ENST00000488218 1270 ntBASIC21.21■□□□□ 0.99
COL15A1P39059 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC21.21■□□□□ 0.99
COL15A1P39059 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC21.21■□□□□ 0.99
COL15A1P39059 SRP9-204ENST00000619790 377 ntTSL 2 BASIC21.21■□□□□ 0.99
COL15A1P39059 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
COL15A1P39059 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC21.21■□□□□ 0.99
COL15A1P39059 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
COL15A1P39059 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL15A1P39059 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
COL15A1P39059 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COL15A1P39059 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COL15A1P39059 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL15A1P39059 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL15A1P39059 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL15A1P39059 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC21.2■□□□□ 0.98
COL15A1P39059 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC21.2■□□□□ 0.98
COL15A1P39059 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL15A1P39059 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC21.2■□□□□ 0.98
COL15A1P39059 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL15A1P39059 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
COL15A1P39059 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC21.2■□□□□ 0.98
COL15A1P39059 PP14571-201ENST00000404327 934 ntTSL 2 BASIC21.2■□□□□ 0.98
COL15A1P39059 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC21.2■□□□□ 0.98
COL15A1P39059 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC21.2■□□□□ 0.98
COL15A1P39059 AC009477.1-201ENST00000452936 217 ntBASIC21.2■□□□□ 0.98
COL15A1P39059 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC21.2■□□□□ 0.98
COL15A1P39059 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
COL15A1P39059 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC21.2■□□□□ 0.98
COL15A1P39059 CR383656.12-201ENST00000549567 513 ntBASIC21.2■□□□□ 0.98
COL15A1P39059 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
COL15A1P39059 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL15A1P39059 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
COL15A1P39059 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC21.2■□□□□ 0.98
COL15A1P39059 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.19■□□□□ 0.98
COL15A1P39059 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL15A1P39059 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL15A1P39059 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL15A1P39059 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL15A1P39059 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL15A1P39059 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL15A1P39059 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.19■□□□□ 0.98
COL15A1P39059 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
COL15A1P39059 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
COL15A1P39059 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
COL15A1P39059 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL15A1P39059 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC21.19■□□□□ 0.98
COL15A1P39059 NAA50-208ENST00000497255 789 ntTSL 5 BASIC21.19■□□□□ 0.98
COL15A1P39059 PRYP6-201ENST00000514804 343 ntBASIC21.19■□□□□ 0.98
COL15A1P39059 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC21.19■□□□□ 0.98
COL15A1P39059 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC21.19■□□□□ 0.98
COL15A1P39059 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC21.19■□□□□ 0.98
COL15A1P39059 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL15A1P39059 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC21.19■□□□□ 0.98
COL15A1P39059 GPER1-207ENST00000619052 571 ntTSL 2 BASIC21.19■□□□□ 0.98
COL15A1P39059 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC21.19■□□□□ 0.98
COL15A1P39059 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
COL15A1P39059 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL15A1P39059 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL15A1P39059 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
COL15A1P39059 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL15A1P39059 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL15A1P39059 AL021920.2-201ENST00000624828 1351 ntBASIC21.19■□□□□ 0.98
COL15A1P39059 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL15A1P39059 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC21.18■□□□□ 0.98
COL15A1P39059 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC21.18■□□□□ 0.98
COL15A1P39059 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COL15A1P39059 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COL15A1P39059 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL15A1P39059 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COL15A1P39059 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
COL15A1P39059 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL15A1P39059 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL15A1P39059 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COL15A1P39059 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COL15A1P39059 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms