Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN1P35523 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN1P35523 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CLCN1P35523 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN1P35523 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN1P35523 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN1P35523 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN1P35523 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN1P35523 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CLCN1P35523 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN1P35523 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN1P35523 AC112907.2-201ENST00000448639 330 ntBASIC19.26■□□□□ 0.67
CLCN1P35523 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.26■□□□□ 0.67
CLCN1P35523 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.26■□□□□ 0.67
CLCN1P35523 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.26■□□□□ 0.67
CLCN1P35523 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.26■□□□□ 0.67
CLCN1P35523 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.26■□□□□ 0.67
CLCN1P35523 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.26■□□□□ 0.67
CLCN1P35523 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN1P35523 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC19.26■□□□□ 0.67
CLCN1P35523 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN1P35523 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN1P35523 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CLCN1P35523 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN1P35523 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN1P35523 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN1P35523 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN1P35523 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN1P35523 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CLCN1P35523 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN1P35523 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCN1P35523 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN1P35523 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.25■□□□□ 0.67
CLCN1P35523 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.25■□□□□ 0.67
CLCN1P35523 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN1P35523 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN1P35523 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN1P35523 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC19.25■□□□□ 0.67
CLCN1P35523 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
CLCN1P35523 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN1P35523 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC19.25■□□□□ 0.67
CLCN1P35523 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CLCN1P35523 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CLCN1P35523 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CLCN1P35523 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN1P35523 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN1P35523 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.25■□□□□ 0.67
CLCN1P35523 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN1P35523 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN1P35523 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN1P35523 MIR662-201ENST00000384847 95 ntBASIC19.25■□□□□ 0.67
CLCN1P35523 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.25■□□□□ 0.67
CLCN1P35523 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.25■□□□□ 0.67
CLCN1P35523 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.25■□□□□ 0.67
CLCN1P35523 AC063952.2-201ENST00000498792 1227 ntBASIC19.25■□□□□ 0.67
CLCN1P35523 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.25■□□□□ 0.67
CLCN1P35523 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.25■□□□□ 0.67
CLCN1P35523 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN1P35523 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN1P35523 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN1P35523 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC19.25■□□□□ 0.67
CLCN1P35523 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN1P35523 GRK6P1-201ENST00000400595 1711 ntBASIC19.25■□□□□ 0.67
CLCN1P35523 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.25■□□□□ 0.67
CLCN1P35523 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCN1P35523 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
CLCN1P35523 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC19.25■□□□□ 0.67
CLCN1P35523 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
CLCN1P35523 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.24■□□□□ 0.67
CLCN1P35523 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCN1P35523 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.24■□□□□ 0.67
CLCN1P35523 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC19.24■□□□□ 0.67
CLCN1P35523 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCN1P35523 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCN1P35523 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.24■□□□□ 0.67
CLCN1P35523 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCN1P35523 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCN1P35523 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC19.24■□□□□ 0.67
CLCN1P35523 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCN1P35523 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.24■□□□□ 0.67
CLCN1P35523 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCN1P35523 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCN1P35523 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLCN1P35523 FAM8A6P-201ENST00000407496 1135 ntBASIC19.24■□□□□ 0.67
CLCN1P35523 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.24■□□□□ 0.67
CLCN1P35523 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLCN1P35523 KRT18P48-201ENST00000434763 852 ntBASIC19.24■□□□□ 0.67
CLCN1P35523 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.24■□□□□ 0.67
CLCN1P35523 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLCN1P35523 AC004263.2-201ENST00000617183 678 ntBASIC19.24■□□□□ 0.67
CLCN1P35523 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLCN1P35523 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.24■□□□□ 0.67
CLCN1P35523 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CLCN1P35523 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCN1P35523 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLCN1P35523 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.24■□□□□ 0.67
CLCN1P35523 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.24■□□□□ 0.67
CLCN1P35523 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CLCN1P35523 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCN1P35523 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms