Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFRAP16234 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFRAP16234 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFRAP16234 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFRAP16234 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFRAP16234 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFRAP16234 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.74■□□□□ 0.43
PDGFRAP16234 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFRAP16234 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
PDGFRAP16234 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFRAP16234 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFRAP16234 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.73■□□□□ 0.43
PDGFRAP16234 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFRAP16234 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFRAP16234 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFRAP16234 AL391256.1-201ENST00000443260 1855 ntBASIC17.73■□□□□ 0.43
PDGFRAP16234 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.73■□□□□ 0.43
PDGFRAP16234 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFRAP16234 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.73■□□□□ 0.43
PDGFRAP16234 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PDGFRAP16234 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PDGFRAP16234 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFRAP16234 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PDGFRAP16234 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.73■□□□□ 0.43
PDGFRAP16234 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.73■□□□□ 0.43
PDGFRAP16234 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.73■□□□□ 0.43
PDGFRAP16234 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFRAP16234 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.73■□□□□ 0.43
PDGFRAP16234 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PDGFRAP16234 AC099398.1-201ENST00000567919 2776 ntBASIC17.73■□□□□ 0.43
PDGFRAP16234 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFRAP16234 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.73■□□□□ 0.43
PDGFRAP16234 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.73■□□□□ 0.43
PDGFRAP16234 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
PDGFRAP16234 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.73■□□□□ 0.43
PDGFRAP16234 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.73■□□□□ 0.43
PDGFRAP16234 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.73■□□□□ 0.43
PDGFRAP16234 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PDGFRAP16234 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.73■□□□□ 0.43
PDGFRAP16234 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFRAP16234 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.73■□□□□ 0.43
PDGFRAP16234 REXO1L3P-201ENST00000622202 1288 ntBASIC17.73■□□□□ 0.43
PDGFRAP16234 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFRAP16234 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.73■□□□□ 0.43
PDGFRAP16234 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.73■□□□□ 0.43
PDGFRAP16234 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PDGFRAP16234 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFRAP16234 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.73■□□□□ 0.43
PDGFRAP16234 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFRAP16234 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFRAP16234 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.72■□□□□ 0.43
PDGFRAP16234 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFRAP16234 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFRAP16234 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.72■□□□□ 0.43
PDGFRAP16234 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.72■□□□□ 0.43
PDGFRAP16234 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.72■□□□□ 0.43
PDGFRAP16234 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.72■□□□□ 0.43
PDGFRAP16234 ZNF259P1-201ENST00000407656 1365 ntBASIC17.72■□□□□ 0.43
PDGFRAP16234 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PDGFRAP16234 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFRAP16234 AC145285.3-201ENST00000564603 959 ntBASIC17.72■□□□□ 0.43
PDGFRAP16234 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.72■□□□□ 0.43
PDGFRAP16234 AL671883.3-201ENST00000603274 991 ntBASIC17.72■□□□□ 0.43
PDGFRAP16234 Z83851.2-201ENST00000609564 659 ntBASIC17.72■□□□□ 0.43
PDGFRAP16234 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFRAP16234 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PDGFRAP16234 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PDGFRAP16234 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFRAP16234 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFRAP16234 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFRAP16234 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PDGFRAP16234 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFRAP16234 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.72■□□□□ 0.43
PDGFRAP16234 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFRAP16234 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFRAP16234 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFRAP16234 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.71■□□□□ 0.43
PDGFRAP16234 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFRAP16234 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.71■□□□□ 0.43
PDGFRAP16234 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PDGFRAP16234 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFRAP16234 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFRAP16234 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.71■□□□□ 0.43
PDGFRAP16234 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFRAP16234 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PDGFRAP16234 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.71■□□□□ 0.43
PDGFRAP16234 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PDGFRAP16234 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PDGFRAP16234 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFRAP16234 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFRAP16234 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFRAP16234 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.71■□□□□ 0.43
PDGFRAP16234 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFRAP16234 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFRAP16234 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.71■□□□□ 0.43
PDGFRAP16234 MIR574-201ENST00000385209 96 ntBASIC17.71■□□□□ 0.43
PDGFRAP16234 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFRAP16234 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
PDGFRAP16234 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.71■□□□□ 0.43
PDGFRAP16234 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms