Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
MS4A1P11836 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
MS4A1P11836 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
MS4A1P11836 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MS4A1P11836 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC21.72■■□□□ 1.07
MS4A1P11836 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC21.72■■□□□ 1.07
MS4A1P11836 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC21.72■■□□□ 1.07
MS4A1P11836 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MS4A1P11836 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MS4A1P11836 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC21.72■■□□□ 1.07
MS4A1P11836 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC21.72■■□□□ 1.07
MS4A1P11836 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MS4A1P11836 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MS4A1P11836 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MS4A1P11836 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
MS4A1P11836 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC21.72■■□□□ 1.07
MS4A1P11836 SART3-203ENST00000546611 1184 ntBASIC21.72■■□□□ 1.07
MS4A1P11836 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MS4A1P11836 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC21.72■■□□□ 1.07
MS4A1P11836 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MS4A1P11836 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MS4A1P11836 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
MS4A1P11836 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
MS4A1P11836 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MS4A1P11836 PGR-209ENST00000617858 2816 ntTSL 5 BASIC21.72■■□□□ 1.07
MS4A1P11836 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
MS4A1P11836 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MS4A1P11836 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC21.72■■□□□ 1.07
MS4A1P11836 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MS4A1P11836 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
MS4A1P11836 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC21.71■■□□□ 1.07
MS4A1P11836 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
MS4A1P11836 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MS4A1P11836 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MS4A1P11836 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC21.71■■□□□ 1.07
MS4A1P11836 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MS4A1P11836 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MS4A1P11836 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MS4A1P11836 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MS4A1P11836 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MS4A1P11836 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
MS4A1P11836 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
MS4A1P11836 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.71■■□□□ 1.07
MS4A1P11836 AC004706.3-202ENST00000621574 984 ntBASIC21.71■■□□□ 1.07
MS4A1P11836 CES3-203ENST00000543856 3178 ntTSL 2 BASIC21.71■■□□□ 1.07
MS4A1P11836 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC21.71■■□□□ 1.07
MS4A1P11836 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
MS4A1P11836 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
MS4A1P11836 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
MS4A1P11836 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
MS4A1P11836 KRT8P49-201ENST00000604166 1432 ntBASIC21.71■■□□□ 1.07
MS4A1P11836 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
MS4A1P11836 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MS4A1P11836 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC21.7■■□□□ 1.06
MS4A1P11836 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MS4A1P11836 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
MS4A1P11836 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MS4A1P11836 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
MS4A1P11836 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MS4A1P11836 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MS4A1P11836 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC21.7■■□□□ 1.06
MS4A1P11836 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21.7■■□□□ 1.06
MS4A1P11836 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC21.7■■□□□ 1.06
MS4A1P11836 ARTN-206ENST00000472435 402 ntTSL 3 BASIC21.7■■□□□ 1.06
MS4A1P11836 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21.7■■□□□ 1.06
MS4A1P11836 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC21.7■■□□□ 1.06
MS4A1P11836 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC21.7■■□□□ 1.06
MS4A1P11836 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.7■■□□□ 1.06
MS4A1P11836 RNF151-202ENST00000569210 853 ntTSL 2 BASIC21.7■■□□□ 1.06
MS4A1P11836 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.7■■□□□ 1.06
MS4A1P11836 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MS4A1P11836 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
MS4A1P11836 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MS4A1P11836 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
MS4A1P11836 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MS4A1P11836 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MS4A1P11836 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
MS4A1P11836 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC21.7■■□□□ 1.06
MS4A1P11836 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
MS4A1P11836 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MS4A1P11836 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC21.7■■□□□ 1.06
MS4A1P11836 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MS4A1P11836 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MS4A1P11836 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MS4A1P11836 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MS4A1P11836 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MS4A1P11836 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MS4A1P11836 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MS4A1P11836 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
MS4A1P11836 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC21.69■■□□□ 1.06
MS4A1P11836 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC21.69■■□□□ 1.06
MS4A1P11836 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MS4A1P11836 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MS4A1P11836 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
MS4A1P11836 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC21.69■■□□□ 1.06
MS4A1P11836 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MS4A1P11836 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC21.69■■□□□ 1.06
MS4A1P11836 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MS4A1P11836 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC21.69■■□□□ 1.06
MS4A1P11836 AF228730.7-201ENST00000641842 219 ntBASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms