Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 AC073347.1-201ENST00000421633 2643 ntBASIC16.41■□□□□ 0.22
LINGO3P0C6S8 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 PCED1CP-201ENST00000419887 785 ntBASIC16.41■□□□□ 0.22
LINGO3P0C6S8 TSPY12P-201ENST00000421279 868 ntBASIC16.41■□□□□ 0.22
LINGO3P0C6S8 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 AC011498.5-201ENST00000592027 486 ntBASIC16.41■□□□□ 0.22
LINGO3P0C6S8 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 AC116407.2-201ENST00000613639 860 ntBASIC16.41■□□□□ 0.22
LINGO3P0C6S8 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 HLA-J-201ENST00000462773 1622 ntBASIC16.41■□□□□ 0.22
LINGO3P0C6S8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINGO3P0C6S8 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 AC100803.2-201ENST00000562459 1963 ntBASIC16.4■□□□□ 0.22
LINGO3P0C6S8 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 AP002414.2-201ENST00000591780 3365 ntBASIC16.4■□□□□ 0.22
LINGO3P0C6S8 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINGO3P0C6S8 AC013268.4-201ENST00000637413 2228 ntBASIC16.39■□□□□ 0.22
LINGO3P0C6S8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.39■□□□□ 0.22
LINGO3P0C6S8 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINGO3P0C6S8 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LINGO3P0C6S8 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LINGO3P0C6S8 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LINGO3P0C6S8 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LINGO3P0C6S8 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.39■□□□□ 0.21
LINGO3P0C6S8 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.39■□□□□ 0.21
LINGO3P0C6S8 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINGO3P0C6S8 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINGO3P0C6S8 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LINGO3P0C6S8 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.39■□□□□ 0.21
LINGO3P0C6S8 AL359258.3-201ENST00000622910 2331 ntBASIC16.39■□□□□ 0.21
LINGO3P0C6S8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.39■□□□□ 0.21
LINGO3P0C6S8 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LINGO3P0C6S8 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.39■□□□□ 0.21
LINGO3P0C6S8 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LINGO3P0C6S8 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINGO3P0C6S8 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINGO3P0C6S8 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms