Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
TPM3P06753 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
TPM3P06753 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TPM3P06753 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.02■□□□□ 0.63
TPM3P06753 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TPM3P06753 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.01■□□□□ 0.63
TPM3P06753 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM3P06753 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TPM3P06753 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM3P06753 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM3P06753 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
TPM3P06753 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TPM3P06753 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.01■□□□□ 0.63
TPM3P06753 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM3P06753 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TPM3P06753 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM3P06753 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.01■□□□□ 0.63
TPM3P06753 SPDYE15P-201ENST00000424157 909 ntBASIC19.01■□□□□ 0.63
TPM3P06753 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TPM3P06753 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.01■□□□□ 0.63
TPM3P06753 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC19.01■□□□□ 0.63
TPM3P06753 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TPM3P06753 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TPM3P06753 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TPM3P06753 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM3P06753 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC19.01■□□□□ 0.63
TPM3P06753 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM3P06753 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM3P06753 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TPM3P06753 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TPM3P06753 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TPM3P06753 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM3P06753 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM3P06753 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM3P06753 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TPM3P06753 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM3P06753 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19■□□□□ 0.63
TPM3P06753 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM3P06753 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
TPM3P06753 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
TPM3P06753 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TPM3P06753 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
TPM3P06753 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
TPM3P06753 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM3P06753 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19■□□□□ 0.63
TPM3P06753 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TPM3P06753 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM3P06753 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19■□□□□ 0.63
TPM3P06753 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19■□□□□ 0.63
TPM3P06753 AC103564.2-201ENST00000432853 1299 ntBASIC19■□□□□ 0.63
TPM3P06753 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19■□□□□ 0.63
TPM3P06753 ATP5G1P1-201ENST00000448724 379 ntBASIC19■□□□□ 0.63
TPM3P06753 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM3P06753 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19■□□□□ 0.63
TPM3P06753 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19■□□□□ 0.63
TPM3P06753 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19■□□□□ 0.63
TPM3P06753 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
TPM3P06753 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19■□□□□ 0.63
TPM3P06753 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19■□□□□ 0.63
TPM3P06753 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TPM3P06753 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19■□□□□ 0.63
TPM3P06753 AL391256.1-201ENST00000443260 1855 ntBASIC19■□□□□ 0.63
TPM3P06753 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM3P06753 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM3P06753 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM3P06753 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TPM3P06753 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM3P06753 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC19■□□□□ 0.63
TPM3P06753 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM3P06753 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TPM3P06753 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM3P06753 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM3P06753 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM3P06753 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19■□□□□ 0.63
TPM3P06753 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPM3P06753 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TPM3P06753 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TPM3P06753 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPM3P06753 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPM3P06753 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPM3P06753 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TPM3P06753 AC007967.3-201ENST00000434308 558 ntBASIC18.99■□□□□ 0.63
TPM3P06753 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.99■□□□□ 0.63
TPM3P06753 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TPM3P06753 AL359075.1-203ENST00000462729 1002 ntBASIC18.99■□□□□ 0.63
TPM3P06753 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TPM3P06753 AL441883.1-201ENST00000566170 1045 ntBASIC18.99■□□□□ 0.63
TPM3P06753 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.99■□□□□ 0.63
TPM3P06753 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPM3P06753 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TPM3P06753 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
TPM3P06753 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.99■□□□□ 0.63
TPM3P06753 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
TPM3P06753 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPM3P06753 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
TPM3P06753 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPM3P06753 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TPM3P06753 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TPM3P06753 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.98■□□□□ 0.63
TPM3P06753 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms