Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
APPP05067 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
APPP05067 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
APPP05067 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
APPP05067 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
APPP05067 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
APPP05067 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
APPP05067 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.26■□□□□ 0.83
APPP05067 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
APPP05067 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
APPP05067 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
APPP05067 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
APPP05067 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.26■□□□□ 0.83
APPP05067 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.26■□□□□ 0.83
APPP05067 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
APPP05067 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.26■□□□□ 0.83
APPP05067 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.26■□□□□ 0.83
APPP05067 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.26■□□□□ 0.83
APPP05067 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC20.26■□□□□ 0.83
APPP05067 AL513190.1-201ENST00000621254 727 ntBASIC20.26■□□□□ 0.83
APPP05067 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
APPP05067 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
APPP05067 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
APPP05067 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
APPP05067 AC025580.3-201ENST00000617932 1424 ntBASIC20.26■□□□□ 0.83
APPP05067 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
APPP05067 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.26■□□□□ 0.83
APPP05067 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
APPP05067 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
APPP05067 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
APPP05067 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
APPP05067 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
APPP05067 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
APPP05067 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
APPP05067 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
APPP05067 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.25■□□□□ 0.83
APPP05067 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
APPP05067 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
APPP05067 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
APPP05067 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
APPP05067 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
APPP05067 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.25■□□□□ 0.83
APPP05067 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
APPP05067 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
APPP05067 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.25■□□□□ 0.83
APPP05067 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
APPP05067 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.25■□□□□ 0.83
APPP05067 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
APPP05067 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.25■□□□□ 0.83
APPP05067 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.25■□□□□ 0.83
APPP05067 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.25■□□□□ 0.83
APPP05067 RHOQP3-201ENST00000437982 621 ntBASIC20.25■□□□□ 0.83
APPP05067 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
APPP05067 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
APPP05067 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
APPP05067 AC023141.13-201ENST00000604991 943 ntBASIC20.25■□□□□ 0.83
APPP05067 AC007064.4-201ENST00000637740 555 ntBASIC20.25■□□□□ 0.83
APPP05067 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
APPP05067 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
APPP05067 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
APPP05067 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
APPP05067 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
APPP05067 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
APPP05067 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
APPP05067 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
APPP05067 TOP3BP1-201ENST00000420768 1380 ntBASIC20.24■□□□□ 0.83
APPP05067 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
APPP05067 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
APPP05067 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
APPP05067 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
APPP05067 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
APPP05067 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
APPP05067 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
APPP05067 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
APPP05067 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
APPP05067 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
APPP05067 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
APPP05067 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.24■□□□□ 0.83
APPP05067 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
APPP05067 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
APPP05067 AC092865.5-201ENST00000545435 363 ntBASIC20.24■□□□□ 0.83
APPP05067 DUX4L17-201ENST00000557360 1267 ntBASIC20.24■□□□□ 0.83
APPP05067 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.24■□□□□ 0.83
APPP05067 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.24■□□□□ 0.83
APPP05067 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
APPP05067 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
APPP05067 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
APPP05067 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.24■□□□□ 0.83
APPP05067 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
APPP05067 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
APPP05067 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
APPP05067 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
APPP05067 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
APPP05067 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
APPP05067 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
APPP05067 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
APPP05067 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
APPP05067 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
APPP05067 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
APPP05067 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms