Protein–RNA interactions for Protein: P04628

WNT1, Proto-oncogene Wnt-1, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT1P04628 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
WNT1P04628 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
WNT1P04628 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
WNT1P04628 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
WNT1P04628 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
WNT1P04628 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
WNT1P04628 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
WNT1P04628 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.51■□□□□ 0.23
WNT1P04628 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
WNT1P04628 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT1P04628 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
WNT1P04628 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT1P04628 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
WNT1P04628 AC134043.2-201ENST00000624206 2238 ntBASIC16.5■□□□□ 0.23
WNT1P04628 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT1P04628 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
WNT1P04628 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
WNT1P04628 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT1P04628 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT1P04628 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
WNT1P04628 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
WNT1P04628 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT1P04628 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT1P04628 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
WNT1P04628 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT1P04628 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.5■□□□□ 0.23
WNT1P04628 AC015922.1-201ENST00000421102 1152 ntBASIC16.5■□□□□ 0.23
WNT1P04628 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.5■□□□□ 0.23
WNT1P04628 AC092580.3-201ENST00000430932 139 ntBASIC16.5■□□□□ 0.23
WNT1P04628 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.5■□□□□ 0.23
WNT1P04628 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.5■□□□□ 0.23
WNT1P04628 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.5■□□□□ 0.23
WNT1P04628 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.5■□□□□ 0.23
WNT1P04628 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.5■□□□□ 0.23
WNT1P04628 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.5■□□□□ 0.23
WNT1P04628 MIR4453-201ENST00000584019 89 ntBASIC16.5■□□□□ 0.23
WNT1P04628 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.5■□□□□ 0.23
WNT1P04628 AL158211.3-201ENST00000607385 239 ntBASIC16.5■□□□□ 0.23
WNT1P04628 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.5■□□□□ 0.23
WNT1P04628 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
WNT1P04628 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT1P04628 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT1P04628 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT1P04628 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
WNT1P04628 AL138688.1-201ENST00000624851 1594 ntBASIC16.5■□□□□ 0.23
WNT1P04628 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT1P04628 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.5■□□□□ 0.23
WNT1P04628 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
WNT1P04628 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT1P04628 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.5■□□□□ 0.23
WNT1P04628 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT1P04628 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.49■□□□□ 0.23
WNT1P04628 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
WNT1P04628 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
WNT1P04628 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
WNT1P04628 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.49■□□□□ 0.23
WNT1P04628 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
WNT1P04628 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
WNT1P04628 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
WNT1P04628 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
WNT1P04628 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
WNT1P04628 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
WNT1P04628 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
WNT1P04628 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
WNT1P04628 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
WNT1P04628 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
WNT1P04628 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.49■□□□□ 0.23
WNT1P04628 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.49■□□□□ 0.23
WNT1P04628 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.49■□□□□ 0.23
WNT1P04628 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.49■□□□□ 0.23
WNT1P04628 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.49■□□□□ 0.23
WNT1P04628 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.49■□□□□ 0.23
WNT1P04628 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.49■□□□□ 0.23
WNT1P04628 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.49■□□□□ 0.23
WNT1P04628 AC069120.2-201ENST00000524091 540 ntBASIC16.49■□□□□ 0.23
WNT1P04628 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.49■□□□□ 0.23
WNT1P04628 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.49■□□□□ 0.23
WNT1P04628 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.49■□□□□ 0.23
WNT1P04628 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.49■□□□□ 0.23
WNT1P04628 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
WNT1P04628 AF228730.6-201ENST00000641497 218 ntBASIC16.49■□□□□ 0.23
WNT1P04628 AC084121.3-201ENST00000641716 218 ntBASIC16.49■□□□□ 0.23
WNT1P04628 AC105233.6-201ENST00000642093 218 ntBASIC16.49■□□□□ 0.23
WNT1P04628 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
WNT1P04628 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
WNT1P04628 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
WNT1P04628 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.49■□□□□ 0.23
WNT1P04628 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.49■□□□□ 0.23
WNT1P04628 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
WNT1P04628 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
WNT1P04628 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
WNT1P04628 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.48■□□□□ 0.23
WNT1P04628 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
WNT1P04628 LINC00895-201ENST00000629028 1637 ntBASIC16.48■□□□□ 0.23
WNT1P04628 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
WNT1P04628 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.48■□□□□ 0.23
WNT1P04628 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
WNT1P04628 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.48■□□□□ 0.23
WNT1P04628 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.48■□□□□ 0.23
WNT1P04628 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms