Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.42■□□□□ 0.06
P04436 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
P04436 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
P04436 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.42■□□□□ 0.06
P04436 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
P04436 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
P04436 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
P04436 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
P04436 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
P04436 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
P04436 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
P04436 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
P04436 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.41■□□□□ 0.06
P04436 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
P04436 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
P04436 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
P04436 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
P04436 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
P04436 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
P04436 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
P04436 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
P04436 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
P04436 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
P04436 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
P04436 AC131009.4-201ENST00000624048 1740 ntBASIC15.41■□□□□ 0.06
P04436 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
P04436 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.41■□□□□ 0.06
P04436 HMGA1P7-201ENST00000406908 502 ntBASIC15.41■□□□□ 0.06
P04436 AP006288.1-201ENST00000446065 395 ntBASIC15.41■□□□□ 0.06
P04436 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.41■□□□□ 0.06
P04436 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.41■□□□□ 0.06
P04436 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
P04436 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
P04436 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
P04436 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.41■□□□□ 0.06
P04436 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.41■□□□□ 0.06
P04436 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.41■□□□□ 0.06
P04436 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.41■□□□□ 0.06
P04436 MPDU1-223ENST00000582151 728 ntBASIC15.41■□□□□ 0.06
P04436 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.41■□□□□ 0.06
P04436 AL596442.2-201ENST00000610240 980 ntBASIC15.41■□□□□ 0.06
P04436 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
P04436 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.41■□□□□ 0.06
P04436 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.41■□□□□ 0.06
P04436 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.41■□□□□ 0.06
P04436 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
P04436 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
P04436 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
P04436 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
P04436 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
P04436 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
P04436 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
P04436 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
P04436 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.41■□□□□ 0.06
P04436 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
P04436 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
P04436 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
P04436 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.41■□□□□ 0.06
P04436 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.4■□□□□ 0.06
P04436 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
P04436 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
P04436 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
P04436 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
P04436 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
P04436 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
P04436 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.4■□□□□ 0.06
P04436 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
P04436 AC254562.1-201ENST00000417586 456 ntBASIC15.4■□□□□ 0.06
P04436 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.4■□□□□ 0.06
P04436 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.4■□□□□ 0.06
P04436 DNAJB3-202ENST00000449667 1266 ntBASIC15.4■□□□□ 0.06
P04436 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
P04436 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
P04436 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.4■□□□□ 0.06
P04436 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
P04436 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.4■□□□□ 0.06
P04436 DUX4L17-201ENST00000557360 1267 ntBASIC15.4■□□□□ 0.06
P04436 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.4■□□□□ 0.06
P04436 AP001160.2-201ENST00000596071 487 ntBASIC15.4■□□□□ 0.06
P04436 AC092902.6-201ENST00000641783 218 ntBASIC15.4■□□□□ 0.06
P04436 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
P04436 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
P04436 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
P04436 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
P04436 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.4■□□□□ 0.06
P04436 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
P04436 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
P04436 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
P04436 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
P04436 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
P04436 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
P04436 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.4■□□□□ 0.06
P04436 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
P04436 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
P04436 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
P04436 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
P04436 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
P04436 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
P04436 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
P04436 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms