Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
COL1A1P02452 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL1A1P02452 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC20.14■□□□□ 0.81
COL1A1P02452 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL1A1P02452 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL1A1P02452 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.13■□□□□ 0.81
COL1A1P02452 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.13■□□□□ 0.81
COL1A1P02452 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL1A1P02452 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL1A1P02452 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL1A1P02452 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL1A1P02452 EDF1-203ENST00000371649 790 ntTSL 2 BASIC20.13■□□□□ 0.81
COL1A1P02452 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL1A1P02452 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC20.13■□□□□ 0.81
COL1A1P02452 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.13■□□□□ 0.81
COL1A1P02452 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL1A1P02452 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC20.13■□□□□ 0.81
COL1A1P02452 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC20.13■□□□□ 0.81
COL1A1P02452 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC20.13■□□□□ 0.81
COL1A1P02452 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC20.13■□□□□ 0.81
COL1A1P02452 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC20.13■□□□□ 0.81
COL1A1P02452 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC20.13■□□□□ 0.81
COL1A1P02452 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC20.13■□□□□ 0.81
COL1A1P02452 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL1A1P02452 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC20.13■□□□□ 0.81
COL1A1P02452 CECR7-204ENST00000609932 568 ntTSL 2 BASIC20.13■□□□□ 0.81
COL1A1P02452 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL1A1P02452 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL1A1P02452 AC073439.1-201ENST00000624121 1774 ntBASIC20.13■□□□□ 0.81
COL1A1P02452 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
COL1A1P02452 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC20.13■□□□□ 0.81
COL1A1P02452 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL1A1P02452 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL1A1P02452 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL1A1P02452 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.13■□□□□ 0.81
COL1A1P02452 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
COL1A1P02452 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL1A1P02452 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL1A1P02452 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL1A1P02452 GRAP-202ENST00000395635 834 ntTSL 2 BASIC20.12■□□□□ 0.81
COL1A1P02452 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.12■□□□□ 0.81
COL1A1P02452 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC20.12■□□□□ 0.81
COL1A1P02452 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.12■□□□□ 0.81
COL1A1P02452 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL1A1P02452 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL1A1P02452 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL1A1P02452 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL1A1P02452 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.12■□□□□ 0.81
COL1A1P02452 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL1A1P02452 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.12■□□□□ 0.81
COL1A1P02452 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
COL1A1P02452 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL1A1P02452 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.12■□□□□ 0.81
COL1A1P02452 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL1A1P02452 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC20.11■□□□□ 0.81
COL1A1P02452 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
COL1A1P02452 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC20.11■□□□□ 0.81
COL1A1P02452 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
COL1A1P02452 GSAP-205ENST00000430584 600 ntTSL 5 BASIC20.11■□□□□ 0.81
COL1A1P02452 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC20.11■□□□□ 0.81
COL1A1P02452 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC20.11■□□□□ 0.81
COL1A1P02452 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC20.11■□□□□ 0.81
COL1A1P02452 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL1A1P02452 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
COL1A1P02452 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL1A1P02452 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.11■□□□□ 0.81
COL1A1P02452 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
COL1A1P02452 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL1A1P02452 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL1A1P02452 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
COL1A1P02452 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL1A1P02452 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL1A1P02452 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL1A1P02452 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.11■□□□□ 0.81
COL1A1P02452 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
COL1A1P02452 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL1A1P02452 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL1A1P02452 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC20.11■□□□□ 0.81
COL1A1P02452 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC20.11■□□□□ 0.81
COL1A1P02452 KRT18P34-201ENST00000488218 1270 ntBASIC20.11■□□□□ 0.81
COL1A1P02452 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.11■□□□□ 0.81
COL1A1P02452 RARRES2P9-201ENST00000565168 469 ntBASIC20.11■□□□□ 0.81
COL1A1P02452 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
COL1A1P02452 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL1A1P02452 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL1A1P02452 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC20.1■□□□□ 0.81
COL1A1P02452 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL1A1P02452 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL1A1P02452 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL1A1P02452 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
COL1A1P02452 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.1■□□□□ 0.81
COL1A1P02452 KRT8P39-201ENST00000396270 1433 ntBASIC20.1■□□□□ 0.81
COL1A1P02452 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.1■□□□□ 0.81
COL1A1P02452 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL1A1P02452 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.1■□□□□ 0.81
COL1A1P02452 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL1A1P02452 AL512652.2-201ENST00000625156 1716 ntBASIC20.1■□□□□ 0.81
COL1A1P02452 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL1A1P02452 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
COL1A1P02452 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms