Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LTAP01374 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LTAP01374 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LTAP01374 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LTAP01374 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LTAP01374 FES-204ENST00000414248 2327 ntTSL 2 BASIC12.77□□□□□ -0.37
LTAP01374 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LTAP01374 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LTAP01374 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC12.77□□□□□ -0.37
LTAP01374 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
LTAP01374 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
LTAP01374 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LTAP01374 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LTAP01374 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
LTAP01374 AL136379.1-201ENST00000623471 2642 ntBASIC12.76□□□□□ -0.37
LTAP01374 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LTAP01374 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LTAP01374 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC12.76□□□□□ -0.37
LTAP01374 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LTAP01374 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LTAP01374 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LTAP01374 AC023824.1-201ENST00000562945 2975 ntBASIC12.76□□□□□ -0.37
LTAP01374 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC12.76□□□□□ -0.37
LTAP01374 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LTAP01374 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LTAP01374 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
LTAP01374 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LTAP01374 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LTAP01374 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC12.76□□□□□ -0.37
LTAP01374 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC12.76□□□□□ -0.37
LTAP01374 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LTAP01374 CD70-202ENST00000423145 881 ntTSL 2 BASIC12.76□□□□□ -0.37
LTAP01374 AC092597.1-201ENST00000487352 616 ntBASIC12.76□□□□□ -0.37
LTAP01374 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LTAP01374 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
LTAP01374 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC12.76□□□□□ -0.37
LTAP01374 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC12.76□□□□□ -0.37
LTAP01374 AL139011.1-202ENST00000642063 584 ntBASIC12.76□□□□□ -0.37
LTAP01374 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC12.76□□□□□ -0.37
LTAP01374 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
LTAP01374 AC002310.6-201ENST00000624451 1377 ntBASIC12.76□□□□□ -0.37
LTAP01374 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LTAP01374 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
LTAP01374 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC12.76□□□□□ -0.37
LTAP01374 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC12.76□□□□□ -0.37
LTAP01374 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
LTAP01374 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LTAP01374 AMT-233ENST00000636522 1620 ntTSL 2 BASIC12.76□□□□□ -0.37
LTAP01374 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LTAP01374 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LTAP01374 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
LTAP01374 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
LTAP01374 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
LTAP01374 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LTAP01374 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LTAP01374 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
LTAP01374 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
LTAP01374 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LTAP01374 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LTAP01374 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LTAP01374 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LTAP01374 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
LTAP01374 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC12.76□□□□□ -0.37
LTAP01374 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
LTAP01374 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LTAP01374 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC12.75□□□□□ -0.37
LTAP01374 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LTAP01374 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LTAP01374 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LTAP01374 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LTAP01374 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
LTAP01374 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
LTAP01374 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
LTAP01374 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LTAP01374 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LTAP01374 ANKRD20A18P-201ENST00000359341 492 ntBASIC12.75□□□□□ -0.37
LTAP01374 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LTAP01374 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC12.75□□□□□ -0.37
LTAP01374 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LTAP01374 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.75□□□□□ -0.37
LTAP01374 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
LTAP01374 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LTAP01374 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC12.75□□□□□ -0.37
LTAP01374 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LTAP01374 SNORA78-201ENST00000459373 127 ntBASIC12.75□□□□□ -0.37
LTAP01374 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC12.75□□□□□ -0.37
LTAP01374 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC12.75□□□□□ -0.37
LTAP01374 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC12.75□□□□□ -0.37
LTAP01374 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LTAP01374 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LTAP01374 AL441883.1-201ENST00000566170 1045 ntBASIC12.75□□□□□ -0.37
LTAP01374 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC12.75□□□□□ -0.37
LTAP01374 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
LTAP01374 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LTAP01374 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC12.75□□□□□ -0.37
LTAP01374 AL138831.2-201ENST00000606564 490 ntBASIC12.75□□□□□ -0.37
LTAP01374 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
LTAP01374 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC12.75□□□□□ -0.37
LTAP01374 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LTAP01374 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms