Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TNFRSF6BO95407 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 BID-213ENST00000615414 2236 ntTSL 5 BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 ABHD17AP1-201ENST00000358206 933 ntBASIC12.32□□□□□ -0.44
TNFRSF6BO95407 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 RPS2P55-201ENST00000397318 883 ntBASIC12.32□□□□□ -0.44
TNFRSF6BO95407 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 DDT-203ENST00000403754 569 ntTSL 3 BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 DDT-206ENST00000430101 573 ntTSL 2 BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 KRT18P6-201ENST00000555540 1265 ntBASIC12.32□□□□□ -0.44
TNFRSF6BO95407 AC109462.3-201ENST00000573934 613 ntBASIC12.32□□□□□ -0.44
TNFRSF6BO95407 NEK4P2-201ENST00000580004 1012 ntBASIC12.32□□□□□ -0.44
TNFRSF6BO95407 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TNFRSF6BO95407 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 GCK-202ENST00000345378 2421 ntTSL 2 BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 UNC93B2-201ENST00000285383 730 ntBASIC12.31□□□□□ -0.44
TNFRSF6BO95407 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 MTCL1P1-201ENST00000446207 792 ntBASIC12.31□□□□□ -0.44
TNFRSF6BO95407 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 C2orf69P3-201ENST00000565542 1120 ntBASIC12.31□□□□□ -0.44
TNFRSF6BO95407 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 TEN1-204ENST00000588202 862 ntTSL 3 BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 AL359736.2-201ENST00000621992 437 ntBASIC12.31□□□□□ -0.44
TNFRSF6BO95407 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TNFRSF6BO95407 AMT-206ENST00000458307 1860 ntTSL 2 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms