Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.74□□□□□ -0.05
UPK1BO75841 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
UPK1BO75841 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1BO75841 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1BO75841 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.74□□□□□ -0.05
UPK1BO75841 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
UPK1BO75841 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1BO75841 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
UPK1BO75841 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1BO75841 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1BO75841 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
UPK1BO75841 AC136621.1-201ENST00000624017 2304 ntBASIC14.74□□□□□ -0.05
UPK1BO75841 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
UPK1BO75841 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1BO75841 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
UPK1BO75841 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
UPK1BO75841 KRT18P29-201ENST00000397031 1267 ntBASIC14.74□□□□□ -0.05
UPK1BO75841 AC112497.1-201ENST00000624824 639 ntBASIC14.74□□□□□ -0.05
UPK1BO75841 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1BO75841 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1BO75841 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
UPK1BO75841 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.74□□□□□ -0.05
UPK1BO75841 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1BO75841 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1BO75841 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1BO75841 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1BO75841 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.74□□□□□ -0.05
UPK1BO75841 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.74□□□□□ -0.05
UPK1BO75841 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
UPK1BO75841 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
UPK1BO75841 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1BO75841 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1BO75841 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1BO75841 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.74□□□□□ -0.05
UPK1BO75841 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
UPK1BO75841 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1BO75841 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1BO75841 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
UPK1BO75841 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1BO75841 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1BO75841 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.73□□□□□ -0.05
UPK1BO75841 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1BO75841 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1BO75841 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1BO75841 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1BO75841 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
UPK1BO75841 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1BO75841 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC14.73□□□□□ -0.05
UPK1BO75841 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
UPK1BO75841 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1BO75841 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1BO75841 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1BO75841 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
UPK1BO75841 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1BO75841 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1BO75841 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1BO75841 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1BO75841 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
UPK1BO75841 RPS2P4-201ENST00000476944 856 ntBASIC14.73□□□□□ -0.05
UPK1BO75841 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC14.73□□□□□ -0.05
UPK1BO75841 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.73□□□□□ -0.05
UPK1BO75841 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
UPK1BO75841 AC010240.3-201ENST00000607688 395 ntBASIC14.73□□□□□ -0.05
UPK1BO75841 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1BO75841 AC016027.1-202ENST00000607927 1699 ntBASIC14.73□□□□□ -0.05
UPK1BO75841 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
UPK1BO75841 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
UPK1BO75841 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1BO75841 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.73□□□□□ -0.05
UPK1BO75841 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1BO75841 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UPK1BO75841 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.72□□□□□ -0.05
UPK1BO75841 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1BO75841 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
UPK1BO75841 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1BO75841 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1BO75841 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1BO75841 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1BO75841 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1BO75841 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
UPK1BO75841 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.72□□□□□ -0.05
UPK1BO75841 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.72□□□□□ -0.05
UPK1BO75841 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1BO75841 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.72□□□□□ -0.05
UPK1BO75841 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1BO75841 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.72□□□□□ -0.05
UPK1BO75841 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1BO75841 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1BO75841 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.72□□□□□ -0.05
UPK1BO75841 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.72□□□□□ -0.05
UPK1BO75841 GXYLT1P2-201ENST00000433312 1230 ntBASIC14.72□□□□□ -0.05
UPK1BO75841 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.72□□□□□ -0.05
UPK1BO75841 KSR1P1-201ENST00000446298 240 ntBASIC14.72□□□□□ -0.05
UPK1BO75841 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC14.72□□□□□ -0.05
UPK1BO75841 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC14.72□□□□□ -0.05
UPK1BO75841 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.72□□□□□ -0.05
UPK1BO75841 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.72□□□□□ -0.05
UPK1BO75841 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.72□□□□□ -0.05
UPK1BO75841 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1BO75841 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms