Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CHD2O14647 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CHD2O14647 TUBB1P2-201ENST00000422712 1306 ntBASIC23.06■■□□□ 1.28
CHD2O14647 TUBB1P1-201ENST00000503144 1300 ntBASIC23.06■■□□□ 1.28
CHD2O14647 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CHD2O14647 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
CHD2O14647 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.06■■□□□ 1.28
CHD2O14647 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC23.06■■□□□ 1.28
CHD2O14647 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CHD2O14647 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CHD2O14647 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CHD2O14647 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC23.05■■□□□ 1.28
CHD2O14647 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
CHD2O14647 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC23.05■■□□□ 1.28
CHD2O14647 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC23.05■■□□□ 1.28
CHD2O14647 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CHD2O14647 FADS2-205ENST00000517839 469 ntTSL 3 BASIC23.05■■□□□ 1.28
CHD2O14647 AL583810.1-201ENST00000553344 1045 ntBASIC23.05■■□□□ 1.28
CHD2O14647 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
CHD2O14647 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC23.05■■□□□ 1.28
CHD2O14647 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CHD2O14647 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CHD2O14647 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CHD2O14647 NSL1-201ENST00000366976 722 ntTSL 2 BASIC23.05■■□□□ 1.28
CHD2O14647 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CHD2O14647 VMO1-203ENST00000416307 712 ntTSL 2 BASIC23.05■■□□□ 1.28
CHD2O14647 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC23.05■■□□□ 1.28
CHD2O14647 CD74-212ENST00000524315 584 ntTSL 5 BASIC23.05■■□□□ 1.28
CHD2O14647 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC23.05■■□□□ 1.28
CHD2O14647 AC124947.2-201ENST00000547118 1133 ntBASIC23.05■■□□□ 1.28
CHD2O14647 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC23.05■■□□□ 1.28
CHD2O14647 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CHD2O14647 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CHD2O14647 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CHD2O14647 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC23.04■■□□□ 1.28
CHD2O14647 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CHD2O14647 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
CHD2O14647 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
CHD2O14647 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC23.04■■□□□ 1.28
CHD2O14647 AC099336.1-201ENST00000417053 1171 ntBASIC23.04■■□□□ 1.28
CHD2O14647 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
CHD2O14647 ACTBP11-201ENST00000436287 1126 ntBASIC23.04■■□□□ 1.28
CHD2O14647 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
CHD2O14647 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC23.04■■□□□ 1.28
CHD2O14647 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC23.04■■□□□ 1.28
CHD2O14647 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC23.04■■□□□ 1.28
CHD2O14647 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CHD2O14647 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
CHD2O14647 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CHD2O14647 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
CHD2O14647 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
CHD2O14647 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CHD2O14647 AC020907.1-201ENST00000616460 1350 ntBASIC23.04■■□□□ 1.28
CHD2O14647 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CHD2O14647 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
CHD2O14647 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC23.04■■□□□ 1.28
CHD2O14647 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CHD2O14647 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC23.03■■□□□ 1.28
CHD2O14647 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CHD2O14647 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC23.03■■□□□ 1.28
CHD2O14647 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC23.03■■□□□ 1.28
CHD2O14647 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC23.03■■□□□ 1.28
CHD2O14647 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
CHD2O14647 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CHD2O14647 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CHD2O14647 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CHD2O14647 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC23.03■■□□□ 1.28
CHD2O14647 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CHD2O14647 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CHD2O14647 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC23.03■■□□□ 1.28
CHD2O14647 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CHD2O14647 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CHD2O14647 PTK7-212ENST00000476760 902 ntTSL 2 BASIC23.03■■□□□ 1.28
CHD2O14647 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
CHD2O14647 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
CHD2O14647 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC23.03■■□□□ 1.28
CHD2O14647 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CHD2O14647 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC23.03■■□□□ 1.28
CHD2O14647 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC23.03■■□□□ 1.28
CHD2O14647 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CHD2O14647 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CHD2O14647 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CHD2O14647 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC23.02■■□□□ 1.28
CHD2O14647 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC23.02■■□□□ 1.28
CHD2O14647 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC23.02■■□□□ 1.28
CHD2O14647 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CHD2O14647 AC098818.2-201ENST00000564925 2320 ntBASIC23.02■■□□□ 1.28
CHD2O14647 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC23.02■■□□□ 1.28
CHD2O14647 AC108725.1-201ENST00000495472 409 ntBASIC23.02■■□□□ 1.28
CHD2O14647 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC23.02■■□□□ 1.28
CHD2O14647 MIR5189-201ENST00000577370 114 ntBASIC23.02■■□□□ 1.28
CHD2O14647 AC025048.3-201ENST00000590609 569 ntBASIC23.02■■□□□ 1.28
CHD2O14647 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC23.02■■□□□ 1.28
CHD2O14647 AC005702.4-201ENST00000618393 416 ntBASIC23.02■■□□□ 1.28
CHD2O14647 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CHD2O14647 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
CHD2O14647 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC23.02■■□□□ 1.28
CHD2O14647 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CHD2O14647 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CHD2O14647 TPR-209ENST00000613151 2478 ntTSL 5 BASIC23.02■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms