Protein–RNA interactions for Protein: O00358

FOXE1, Forkhead box protein E1, humanhuman

Predicted RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXE1O00358 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXE1O00358 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXE1O00358 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FOXE1O00358 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXE1O00358 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXE1O00358 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
FOXE1O00358 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.09■□□□□ 0.17
FOXE1O00358 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
FOXE1O00358 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXE1O00358 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXE1O00358 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FOXE1O00358 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXE1O00358 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXE1O00358 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXE1O00358 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FOXE1O00358 MRPL20P1-201ENST00000400819 433 ntBASIC16.09■□□□□ 0.17
FOXE1O00358 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.09■□□□□ 0.17
FOXE1O00358 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXE1O00358 HCG4-201ENST00000418983 998 ntBASIC16.09■□□□□ 0.17
FOXE1O00358 AL031284.1-201ENST00000419297 478 ntBASIC16.09■□□□□ 0.17
FOXE1O00358 PMS2P1-201ENST00000431037 1228 ntBASIC16.09■□□□□ 0.17
FOXE1O00358 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.09■□□□□ 0.17
FOXE1O00358 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.09■□□□□ 0.17
FOXE1O00358 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXE1O00358 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.09■□□□□ 0.17
FOXE1O00358 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
FOXE1O00358 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.09■□□□□ 0.17
FOXE1O00358 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.09■□□□□ 0.17
FOXE1O00358 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.09■□□□□ 0.17
FOXE1O00358 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
FOXE1O00358 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.09■□□□□ 0.17
FOXE1O00358 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.09■□□□□ 0.17
FOXE1O00358 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.09■□□□□ 0.17
FOXE1O00358 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.09■□□□□ 0.17
FOXE1O00358 AP001350.2-201ENST00000625104 1094 ntBASIC16.09■□□□□ 0.17
FOXE1O00358 OR6D1P-203ENST00000641209 4860 ntBASIC16.09■□□□□ 0.17
FOXE1O00358 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FOXE1O00358 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.09■□□□□ 0.17
FOXE1O00358 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXE1O00358 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
FOXE1O00358 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXE1O00358 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
FOXE1O00358 UBALD1-205ENST00000590891 2641 ntBASIC16.09■□□□□ 0.17
FOXE1O00358 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXE1O00358 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXE1O00358 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FOXE1O00358 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXE1O00358 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXE1O00358 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
FOXE1O00358 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.09■□□□□ 0.17
FOXE1O00358 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXE1O00358 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.08■□□□□ 0.17
FOXE1O00358 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.08■□□□□ 0.17
FOXE1O00358 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.08■□□□□ 0.17
FOXE1O00358 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
FOXE1O00358 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
FOXE1O00358 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.08■□□□□ 0.17
FOXE1O00358 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
FOXE1O00358 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
FOXE1O00358 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
FOXE1O00358 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
FOXE1O00358 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.08■□□□□ 0.17
FOXE1O00358 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXE1O00358 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
FOXE1O00358 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXE1O00358 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXE1O00358 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXE1O00358 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
FOXE1O00358 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXE1O00358 PRSS29P-201ENST00000440800 595 ntBASIC16.08■□□□□ 0.16
FOXE1O00358 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXE1O00358 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXE1O00358 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.08■□□□□ 0.16
FOXE1O00358 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.08■□□□□ 0.16
FOXE1O00358 AC087641.1-201ENST00000557561 1021 ntBASIC16.08■□□□□ 0.16
FOXE1O00358 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.08■□□□□ 0.16
FOXE1O00358 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
FOXE1O00358 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.08■□□□□ 0.16
FOXE1O00358 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXE1O00358 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
FOXE1O00358 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXE1O00358 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
FOXE1O00358 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXE1O00358 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXE1O00358 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
FOXE1O00358 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
FOXE1O00358 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
FOXE1O00358 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXE1O00358 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXE1O00358 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXE1O00358 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.08■□□□□ 0.16
FOXE1O00358 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXE1O00358 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXE1O00358 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXE1O00358 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
FOXE1O00358 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.08■□□□□ 0.16
FOXE1O00358 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXE1O00358 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.08■□□□□ 0.16
FOXE1O00358 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXE1O00358 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms