Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.46■□□□□ 0.23
C4orf47A7E2U8 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
C4orf47A7E2U8 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
C4orf47A7E2U8 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
C4orf47A7E2U8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.46■□□□□ 0.23
C4orf47A7E2U8 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.46■□□□□ 0.23
C4orf47A7E2U8 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
C4orf47A7E2U8 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.46■□□□□ 0.23
C4orf47A7E2U8 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.46■□□□□ 0.23
C4orf47A7E2U8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.46■□□□□ 0.23
C4orf47A7E2U8 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
C4orf47A7E2U8 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.46■□□□□ 0.23
C4orf47A7E2U8 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
C4orf47A7E2U8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
C4orf47A7E2U8 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
C4orf47A7E2U8 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
C4orf47A7E2U8 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 AP000997.3-201ENST00000623333 2250 ntBASIC16.45■□□□□ 0.22
C4orf47A7E2U8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 AC098614.1-201ENST00000368528 745 ntBASIC16.45■□□□□ 0.22
C4orf47A7E2U8 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 AL132655.2-201ENST00000596276 594 ntBASIC16.45■□□□□ 0.22
C4orf47A7E2U8 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.45■□□□□ 0.22
C4orf47A7E2U8 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.45■□□□□ 0.22
C4orf47A7E2U8 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
C4orf47A7E2U8 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
C4orf47A7E2U8 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
C4orf47A7E2U8 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
C4orf47A7E2U8 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
C4orf47A7E2U8 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.44■□□□□ 0.22
C4orf47A7E2U8 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
C4orf47A7E2U8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
C4orf47A7E2U8 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
C4orf47A7E2U8 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
C4orf47A7E2U8 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
C4orf47A7E2U8 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
C4orf47A7E2U8 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
C4orf47A7E2U8 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
C4orf47A7E2U8 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
C4orf47A7E2U8 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.44■□□□□ 0.22
C4orf47A7E2U8 AL353779.1-201ENST00000434793 351 ntBASIC16.44■□□□□ 0.22
C4orf47A7E2U8 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
C4orf47A7E2U8 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
C4orf47A7E2U8 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.44■□□□□ 0.22
C4orf47A7E2U8 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.44■□□□□ 0.22
C4orf47A7E2U8 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.44■□□□□ 0.22
C4orf47A7E2U8 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.44■□□□□ 0.22
C4orf47A7E2U8 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.44■□□□□ 0.22
C4orf47A7E2U8 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
C4orf47A7E2U8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
C4orf47A7E2U8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
C4orf47A7E2U8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
C4orf47A7E2U8 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
C4orf47A7E2U8 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
C4orf47A7E2U8 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.44■□□□□ 0.22
C4orf47A7E2U8 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
C4orf47A7E2U8 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.44■□□□□ 0.22
C4orf47A7E2U8 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms