Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CTAGE9A4FU28 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTAGE9A4FU28 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTAGE9A4FU28 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC18.1■□□□□ 0.49
CTAGE9A4FU28 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTAGE9A4FU28 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTAGE9A4FU28 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.1■□□□□ 0.49
CTAGE9A4FU28 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTAGE9A4FU28 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTAGE9A4FU28 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTAGE9A4FU28 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTAGE9A4FU28 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.1■□□□□ 0.49
CTAGE9A4FU28 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTAGE9A4FU28 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTAGE9A4FU28 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTAGE9A4FU28 SLC25A3P1-201ENST00000443844 931 ntBASIC18.1■□□□□ 0.49
CTAGE9A4FU28 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.1■□□□□ 0.49
CTAGE9A4FU28 AC140113.3-201ENST00000605663 199 ntBASIC18.1■□□□□ 0.49
CTAGE9A4FU28 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTAGE9A4FU28 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CTAGE9A4FU28 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTAGE9A4FU28 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
CTAGE9A4FU28 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.1■□□□□ 0.49
CTAGE9A4FU28 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.1■□□□□ 0.49
CTAGE9A4FU28 AC126177.1-201ENST00000547829 2218 ntBASIC18.1■□□□□ 0.49
CTAGE9A4FU28 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTAGE9A4FU28 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CTAGE9A4FU28 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTAGE9A4FU28 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 AC009336.1-201ENST00000608941 1553 ntBASIC18.09■□□□□ 0.49
CTAGE9A4FU28 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 AC133561.5-201ENST00000635547 218 ntBASIC18.09■□□□□ 0.49
CTAGE9A4FU28 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 AL596087.1-201ENST00000400979 1969 ntBASIC18.09■□□□□ 0.49
CTAGE9A4FU28 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 DBET-201ENST00000630918 3363 ntBASIC18.09■□□□□ 0.49
CTAGE9A4FU28 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTAGE9A4FU28 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CTAGE9A4FU28 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.08■□□□□ 0.49
CTAGE9A4FU28 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTAGE9A4FU28 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTAGE9A4FU28 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CTAGE9A4FU28 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTAGE9A4FU28 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CTAGE9A4FU28 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.08■□□□□ 0.49
CTAGE9A4FU28 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.08■□□□□ 0.49
CTAGE9A4FU28 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CTAGE9A4FU28 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CTAGE9A4FU28 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTAGE9A4FU28 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTAGE9A4FU28 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTAGE9A4FU28 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTAGE9A4FU28 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CTAGE9A4FU28 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.08■□□□□ 0.49
CTAGE9A4FU28 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTAGE9A4FU28 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CTAGE9A4FU28 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTAGE9A4FU28 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTAGE9A4FU28 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CTAGE9A4FU28 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.08■□□□□ 0.48
CTAGE9A4FU28 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.08■□□□□ 0.48
CTAGE9A4FU28 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.08■□□□□ 0.48
CTAGE9A4FU28 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CTAGE9A4FU28 AL138966.2-201ENST00000621997 464 ntBASIC18.08■□□□□ 0.48
CTAGE9A4FU28 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTAGE9A4FU28 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTAGE9A4FU28 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms