Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 MRPL20P1-201ENST00000400819 433 ntBASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 AL353135.1-201ENST00000606729 504 ntBASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 AC092865.6-201ENST00000642101 219 ntBASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 AL139384.1-201ENST00000612143 3047 ntBASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA6Q9Y5G7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA6Q9Y5G7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA6Q9Y5G7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.33■□□□□ 0.21
PCDHGA6Q9Y5G7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
PCDHGA6Q9Y5G7 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA6Q9Y5G7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PCDHGA6Q9Y5G7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA6Q9Y5G7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGA6Q9Y5G7 AC254562.1-201ENST00000417586 456 ntBASIC16.33■□□□□ 0.2
PCDHGA6Q9Y5G7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGA6Q9Y5G7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.33■□□□□ 0.2
PCDHGA6Q9Y5G7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHGA6Q9Y5G7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
PCDHGA6Q9Y5G7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
PCDHGA6Q9Y5G7 AL355385.1-201ENST00000606123 409 ntBASIC16.33■□□□□ 0.2
PCDHGA6Q9Y5G7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.33■□□□□ 0.2
PCDHGA6Q9Y5G7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PCDHGA6Q9Y5G7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA6Q9Y5G7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA6Q9Y5G7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA6Q9Y5G7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGA6Q9Y5G7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA6Q9Y5G7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA6Q9Y5G7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA6Q9Y5G7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA6Q9Y5G7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
PCDHGA6Q9Y5G7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGA6Q9Y5G7 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA6Q9Y5G7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA6Q9Y5G7 PCDHA14-201ENST00000506751 2298 ntBASIC16.33■□□□□ 0.2
PCDHGA6Q9Y5G7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA6Q9Y5G7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA6Q9Y5G7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGA6Q9Y5G7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA6Q9Y5G7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA6Q9Y5G7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA6Q9Y5G7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGA6Q9Y5G7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA6Q9Y5G7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA6Q9Y5G7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA6Q9Y5G7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHGA6Q9Y5G7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA6Q9Y5G7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PCDHGA6Q9Y5G7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGA6Q9Y5G7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA6Q9Y5G7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.32■□□□□ 0.2
PCDHGA6Q9Y5G7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA6Q9Y5G7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHGA6Q9Y5G7 AC027796.2-201ENST00000575326 344 ntBASIC16.32■□□□□ 0.2
PCDHGA6Q9Y5G7 MIR4469-201ENST00000583919 79 ntBASIC16.32■□□□□ 0.2
PCDHGA6Q9Y5G7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA6Q9Y5G7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA6Q9Y5G7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA6Q9Y5G7 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA6Q9Y5G7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA6Q9Y5G7 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PCDHGA6Q9Y5G7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA6Q9Y5G7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA6Q9Y5G7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHGA6Q9Y5G7 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms