Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.51■□□□□ 0.71
CTDP1Q9Y5B0 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTDP1Q9Y5B0 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.51■□□□□ 0.71
CTDP1Q9Y5B0 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTDP1Q9Y5B0 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.51■□□□□ 0.71
CTDP1Q9Y5B0 TOP3BP1-201ENST00000420768 1380 ntBASIC19.51■□□□□ 0.71
CTDP1Q9Y5B0 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CTDP1Q9Y5B0 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CTDP1Q9Y5B0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTDP1Q9Y5B0 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTDP1Q9Y5B0 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CTDP1Q9Y5B0 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.51■□□□□ 0.71
CTDP1Q9Y5B0 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTDP1Q9Y5B0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.5■□□□□ 0.71
CTDP1Q9Y5B0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTDP1Q9Y5B0 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTDP1Q9Y5B0 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.5■□□□□ 0.71
CTDP1Q9Y5B0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTDP1Q9Y5B0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CTDP1Q9Y5B0 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.5■□□□□ 0.71
CTDP1Q9Y5B0 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.5■□□□□ 0.71
CTDP1Q9Y5B0 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.5■□□□□ 0.71
CTDP1Q9Y5B0 DUX4L17-201ENST00000557360 1267 ntBASIC19.5■□□□□ 0.71
CTDP1Q9Y5B0 AL135744.1-201ENST00000565098 629 ntBASIC19.5■□□□□ 0.71
CTDP1Q9Y5B0 AC091167.2-201ENST00000579581 588 ntBASIC19.5■□□□□ 0.71
CTDP1Q9Y5B0 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.5■□□□□ 0.71
CTDP1Q9Y5B0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.5■□□□□ 0.71
CTDP1Q9Y5B0 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.5■□□□□ 0.71
CTDP1Q9Y5B0 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.5■□□□□ 0.71
CTDP1Q9Y5B0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CTDP1Q9Y5B0 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTDP1Q9Y5B0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CTDP1Q9Y5B0 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTDP1Q9Y5B0 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTDP1Q9Y5B0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.5■□□□□ 0.71
CTDP1Q9Y5B0 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CTDP1Q9Y5B0 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CTDP1Q9Y5B0 AKAP8P1-201ENST00000434743 1349 ntBASIC19.5■□□□□ 0.71
CTDP1Q9Y5B0 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 AC018470.1-201ENST00000624790 3129 ntBASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 AL627223.1-201ENST00000416693 442 ntBASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 ADH5P3-201ENST00000433842 1137 ntBASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 HLA-J-203ENST00000494367 1087 ntBASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 AC079140.1-201ENST00000508039 487 ntBASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 AC087641.1-201ENST00000557561 1021 ntBASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 AL009183.1-201ENST00000603760 355 ntBASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CTDP1Q9Y5B0 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.48■□□□□ 0.71
CTDP1Q9Y5B0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CTDP1Q9Y5B0 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.48■□□□□ 0.71
CTDP1Q9Y5B0 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTDP1Q9Y5B0 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTDP1Q9Y5B0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTDP1Q9Y5B0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CTDP1Q9Y5B0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CTDP1Q9Y5B0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.48■□□□□ 0.71
CTDP1Q9Y5B0 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CTDP1Q9Y5B0 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTDP1Q9Y5B0 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTDP1Q9Y5B0 MIR770-201ENST00000390219 98 ntBASIC19.48■□□□□ 0.71
CTDP1Q9Y5B0 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.48■□□□□ 0.71
CTDP1Q9Y5B0 KRT18P32-201ENST00000424695 1287 ntBASIC19.48■□□□□ 0.71
CTDP1Q9Y5B0 FAM86GP-201ENST00000448322 971 ntBASIC19.48■□□□□ 0.71
CTDP1Q9Y5B0 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTDP1Q9Y5B0 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CTDP1Q9Y5B0 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CTDP1Q9Y5B0 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.48■□□□□ 0.71
CTDP1Q9Y5B0 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.48■□□□□ 0.71
CTDP1Q9Y5B0 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms