Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.2■□□□□ 0.5
SSX2IPQ9Y2D8 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.2■□□□□ 0.5
SSX2IPQ9Y2D8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.2■□□□□ 0.5
SSX2IPQ9Y2D8 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.2■□□□□ 0.5
SSX2IPQ9Y2D8 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.2■□□□□ 0.5
SSX2IPQ9Y2D8 AC023141.5-201ENST00000458585 616 ntBASIC18.2■□□□□ 0.5
SSX2IPQ9Y2D8 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.2■□□□□ 0.5
SSX2IPQ9Y2D8 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SSX2IPQ9Y2D8 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.2■□□□□ 0.5
SSX2IPQ9Y2D8 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.2■□□□□ 0.5
SSX2IPQ9Y2D8 AC092364.2-202ENST00000597012 1073 ntBASIC18.2■□□□□ 0.5
SSX2IPQ9Y2D8 AC022145.2-201ENST00000598203 171 ntBASIC18.2■□□□□ 0.5
SSX2IPQ9Y2D8 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SSX2IPQ9Y2D8 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SSX2IPQ9Y2D8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.2■□□□□ 0.5
SSX2IPQ9Y2D8 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SSX2IPQ9Y2D8 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SSX2IPQ9Y2D8 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SSX2IPQ9Y2D8 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SSX2IPQ9Y2D8 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SSX2IPQ9Y2D8 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
SSX2IPQ9Y2D8 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SSX2IPQ9Y2D8 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.2■□□□□ 0.5
SSX2IPQ9Y2D8 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.2■□□□□ 0.5
SSX2IPQ9Y2D8 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SSX2IPQ9Y2D8 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.19■□□□□ 0.5
SSX2IPQ9Y2D8 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.19■□□□□ 0.5
SSX2IPQ9Y2D8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SSX2IPQ9Y2D8 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSX2IPQ9Y2D8 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSX2IPQ9Y2D8 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.19■□□□□ 0.5
SSX2IPQ9Y2D8 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSX2IPQ9Y2D8 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSX2IPQ9Y2D8 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSX2IPQ9Y2D8 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSX2IPQ9Y2D8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSX2IPQ9Y2D8 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSX2IPQ9Y2D8 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.19■□□□□ 0.5
SSX2IPQ9Y2D8 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.19■□□□□ 0.5
SSX2IPQ9Y2D8 AC140658.5-201ENST00000438532 169 ntBASIC18.19■□□□□ 0.5
SSX2IPQ9Y2D8 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SSX2IPQ9Y2D8 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SSX2IPQ9Y2D8 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
SSX2IPQ9Y2D8 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SSX2IPQ9Y2D8 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.19■□□□□ 0.5
SSX2IPQ9Y2D8 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SSX2IPQ9Y2D8 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.19■□□□□ 0.5
SSX2IPQ9Y2D8 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.19■□□□□ 0.5
SSX2IPQ9Y2D8 AC026120.1-201ENST00000611536 926 ntBASIC18.19■□□□□ 0.5
SSX2IPQ9Y2D8 AC093028.1-201ENST00000622998 982 ntBASIC18.19■□□□□ 0.5
SSX2IPQ9Y2D8 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSX2IPQ9Y2D8 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SSX2IPQ9Y2D8 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
SSX2IPQ9Y2D8 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 LINC00896-202ENST00000609602 2128 ntBASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 AC134043.2-201ENST00000624206 2238 ntBASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSX2IPQ9Y2D8 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms