Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL20A1Q9P218 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL20A1Q9P218 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
COL20A1Q9P218 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL20A1Q9P218 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL20A1Q9P218 CD99-202ENST00000381180 530 ntTSL 2 BASIC19■□□□□ 0.63
COL20A1Q9P218 MIR770-201ENST00000390219 98 ntBASIC19■□□□□ 0.63
COL20A1Q9P218 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL20A1Q9P218 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19■□□□□ 0.63
COL20A1Q9P218 AL512356.2-201ENST00000546955 174 ntBASIC19■□□□□ 0.63
COL20A1Q9P218 AC015911.4-201ENST00000588022 1070 ntBASIC19■□□□□ 0.63
COL20A1Q9P218 AC005498.2-205ENST00000593218 784 ntBASIC19■□□□□ 0.63
COL20A1Q9P218 AC021097.1-201ENST00000607902 574 ntBASIC19■□□□□ 0.63
COL20A1Q9P218 AP001059.3-201ENST00000619053 235 ntBASIC19■□□□□ 0.63
COL20A1Q9P218 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19■□□□□ 0.63
COL20A1Q9P218 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL20A1Q9P218 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
COL20A1Q9P218 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL20A1Q9P218 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL20A1Q9P218 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19■□□□□ 0.63
COL20A1Q9P218 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL20A1Q9P218 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL20A1Q9P218 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19■□□□□ 0.63
COL20A1Q9P218 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL20A1Q9P218 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL20A1Q9P218 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL20A1Q9P218 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
COL20A1Q9P218 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19■□□□□ 0.63
COL20A1Q9P218 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
COL20A1Q9P218 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL20A1Q9P218 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL20A1Q9P218 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.99■□□□□ 0.63
COL20A1Q9P218 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL20A1Q9P218 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.99■□□□□ 0.63
COL20A1Q9P218 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL20A1Q9P218 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL20A1Q9P218 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL20A1Q9P218 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL20A1Q9P218 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.99■□□□□ 0.63
COL20A1Q9P218 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
COL20A1Q9P218 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL20A1Q9P218 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL20A1Q9P218 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL20A1Q9P218 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.99■□□□□ 0.63
COL20A1Q9P218 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.99■□□□□ 0.63
COL20A1Q9P218 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.99■□□□□ 0.63
COL20A1Q9P218 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.99■□□□□ 0.63
COL20A1Q9P218 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL20A1Q9P218 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.99■□□□□ 0.63
COL20A1Q9P218 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL20A1Q9P218 DUX4L27-201ENST00000554796 1261 ntBASIC18.99■□□□□ 0.63
COL20A1Q9P218 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
COL20A1Q9P218 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL20A1Q9P218 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL20A1Q9P218 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL20A1Q9P218 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.99■□□□□ 0.63
COL20A1Q9P218 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL20A1Q9P218 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL20A1Q9P218 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL20A1Q9P218 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL20A1Q9P218 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL20A1Q9P218 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL20A1Q9P218 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL20A1Q9P218 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL20A1Q9P218 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL20A1Q9P218 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.98■□□□□ 0.63
COL20A1Q9P218 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
COL20A1Q9P218 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL20A1Q9P218 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.98■□□□□ 0.63
COL20A1Q9P218 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL20A1Q9P218 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL20A1Q9P218 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL20A1Q9P218 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL20A1Q9P218 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
COL20A1Q9P218 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.98■□□□□ 0.63
COL20A1Q9P218 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.98■□□□□ 0.63
COL20A1Q9P218 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL20A1Q9P218 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.98■□□□□ 0.63
COL20A1Q9P218 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.98■□□□□ 0.63
COL20A1Q9P218 AC069262.1-201ENST00000539058 672 ntBASIC18.98■□□□□ 0.63
COL20A1Q9P218 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL20A1Q9P218 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
COL20A1Q9P218 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL20A1Q9P218 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
COL20A1Q9P218 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL20A1Q9P218 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL20A1Q9P218 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL20A1Q9P218 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL20A1Q9P218 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
COL20A1Q9P218 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.98■□□□□ 0.63
COL20A1Q9P218 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
COL20A1Q9P218 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL20A1Q9P218 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.98■□□□□ 0.63
COL20A1Q9P218 AP001094.4-201ENST00000579008 2176 ntBASIC18.98■□□□□ 0.63
COL20A1Q9P218 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL20A1Q9P218 AC008677.1-201ENST00000519230 1561 ntBASIC18.98■□□□□ 0.63
COL20A1Q9P218 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL20A1Q9P218 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.97■□□□□ 0.63
COL20A1Q9P218 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL20A1Q9P218 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms