Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 AL118506.1-201ENST00000601296 3082 ntBASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 AC018442.1-201ENST00000421439 2061 ntBASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 AC120024.1-201ENST00000562672 995 ntBASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 AC140479.7-201ENST00000636301 2332 ntBASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 CSPG4P11-201ENST00000560634 4910 ntBASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 AC134407.3-201ENST00000624035 2139 ntBASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 SSR4P1-203ENST00000599569 2260 ntBASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC8.59□□□□□ -1.04
CDC42SE1Q9NRR8 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 WARS-232ENST00000556645 2508 ntTSL 5 BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 HNRNPLP2-201ENST00000568980 1570 ntBASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 KRT8P45-201ENST00000414328 1447 ntBASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDC42SE1Q9NRR8 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms