Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ELL3Q9HB65 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.83□□□□□ -0.04
ELL3Q9HB65 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ELL3Q9HB65 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ELL3Q9HB65 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ELL3Q9HB65 FLJ38576-201ENST00000623820 2459 ntBASIC14.83□□□□□ -0.04
ELL3Q9HB65 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ELL3Q9HB65 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ELL3Q9HB65 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ELL3Q9HB65 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.83□□□□□ -0.04
ELL3Q9HB65 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ELL3Q9HB65 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
ELL3Q9HB65 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.83□□□□□ -0.04
ELL3Q9HB65 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
ELL3Q9HB65 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.83□□□□□ -0.04
ELL3Q9HB65 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.83□□□□□ -0.04
ELL3Q9HB65 MIR3180-1-201ENST00000580374 94 ntBASIC14.83□□□□□ -0.04
ELL3Q9HB65 AP005901.3-202ENST00000581653 237 ntBASIC14.83□□□□□ -0.04
ELL3Q9HB65 MIR3180-3-201ENST00000584616 94 ntBASIC14.83□□□□□ -0.04
ELL3Q9HB65 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.83□□□□□ -0.04
ELL3Q9HB65 AC019129.2-201ENST00000609837 1235 ntBASIC14.83□□□□□ -0.04
ELL3Q9HB65 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.83□□□□□ -0.04
ELL3Q9HB65 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.83□□□□□ -0.04
ELL3Q9HB65 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.83□□□□□ -0.04
ELL3Q9HB65 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ELL3Q9HB65 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ELL3Q9HB65 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
ELL3Q9HB65 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ELL3Q9HB65 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
ELL3Q9HB65 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.83□□□□□ -0.04
ELL3Q9HB65 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ELL3Q9HB65 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ELL3Q9HB65 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ELL3Q9HB65 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ELL3Q9HB65 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ELL3Q9HB65 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.82□□□□□ -0.04
ELL3Q9HB65 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ELL3Q9HB65 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.82□□□□□ -0.04
ELL3Q9HB65 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
ELL3Q9HB65 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.82□□□□□ -0.04
ELL3Q9HB65 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ELL3Q9HB65 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ELL3Q9HB65 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
ELL3Q9HB65 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ELL3Q9HB65 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ELL3Q9HB65 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ELL3Q9HB65 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ELL3Q9HB65 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ELL3Q9HB65 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ELL3Q9HB65 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ELL3Q9HB65 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
ELL3Q9HB65 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.82□□□□□ -0.04
ELL3Q9HB65 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
ELL3Q9HB65 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ELL3Q9HB65 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ELL3Q9HB65 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ELL3Q9HB65 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.82□□□□□ -0.04
ELL3Q9HB65 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ELL3Q9HB65 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
ELL3Q9HB65 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.82□□□□□ -0.04
ELL3Q9HB65 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ELL3Q9HB65 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ELL3Q9HB65 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ELL3Q9HB65 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ELL3Q9HB65 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ELL3Q9HB65 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ELL3Q9HB65 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.82□□□□□ -0.04
ELL3Q9HB65 FAM220CP-201ENST00000395253 831 ntBASIC14.82□□□□□ -0.04
ELL3Q9HB65 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ELL3Q9HB65 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
ELL3Q9HB65 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.82□□□□□ -0.04
ELL3Q9HB65 AC103564.2-201ENST00000432853 1299 ntBASIC14.82□□□□□ -0.04
ELL3Q9HB65 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.82□□□□□ -0.04
ELL3Q9HB65 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
ELL3Q9HB65 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ELL3Q9HB65 AP000867.3-201ENST00000524675 377 ntBASIC14.82□□□□□ -0.04
ELL3Q9HB65 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
ELL3Q9HB65 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.82□□□□□ -0.04
ELL3Q9HB65 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.82□□□□□ -0.04
ELL3Q9HB65 AC005336.2-201ENST00000593183 939 ntBASIC14.82□□□□□ -0.04
ELL3Q9HB65 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.82□□□□□ -0.04
ELL3Q9HB65 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
ELL3Q9HB65 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.82□□□□□ -0.04
ELL3Q9HB65 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.82□□□□□ -0.04
ELL3Q9HB65 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ELL3Q9HB65 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
ELL3Q9HB65 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
ELL3Q9HB65 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ELL3Q9HB65 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ELL3Q9HB65 AC125634.1-201ENST00000438758 1403 ntBASIC14.82□□□□□ -0.04
ELL3Q9HB65 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ELL3Q9HB65 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.82□□□□□ -0.04
ELL3Q9HB65 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ELL3Q9HB65 AC092068.3-201ENST00000587894 2016 ntBASIC14.82□□□□□ -0.04
ELL3Q9HB65 AC008894.3-201ENST00000624324 3103 ntBASIC14.81□□□□□ -0.04
ELL3Q9HB65 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
ELL3Q9HB65 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
ELL3Q9HB65 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ELL3Q9HB65 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ELL3Q9HB65 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms