Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SH2D4AQ9H788 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SH2D4AQ9H788 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.66■□□□□ 0.74
SH2D4AQ9H788 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
SH2D4AQ9H788 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SH2D4AQ9H788 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SH2D4AQ9H788 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SH2D4AQ9H788 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.66■□□□□ 0.74
SH2D4AQ9H788 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SH2D4AQ9H788 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.66■□□□□ 0.74
SH2D4AQ9H788 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SH2D4AQ9H788 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SH2D4AQ9H788 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
SH2D4AQ9H788 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.65■□□□□ 0.74
SH2D4AQ9H788 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SH2D4AQ9H788 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SH2D4AQ9H788 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.65■□□□□ 0.74
SH2D4AQ9H788 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.65■□□□□ 0.74
SH2D4AQ9H788 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SH2D4AQ9H788 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SH2D4AQ9H788 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
SH2D4AQ9H788 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.65■□□□□ 0.74
SH2D4AQ9H788 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SH2D4AQ9H788 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SH2D4AQ9H788 MIR770-201ENST00000390219 98 ntBASIC19.65■□□□□ 0.74
SH2D4AQ9H788 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.65■□□□□ 0.74
SH2D4AQ9H788 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.65■□□□□ 0.74
SH2D4AQ9H788 AC067863.1-201ENST00000494933 530 ntBASIC19.65■□□□□ 0.74
SH2D4AQ9H788 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.65■□□□□ 0.74
SH2D4AQ9H788 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SH2D4AQ9H788 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.65■□□□□ 0.74
SH2D4AQ9H788 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.65■□□□□ 0.74
SH2D4AQ9H788 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SH2D4AQ9H788 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SH2D4AQ9H788 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SH2D4AQ9H788 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SH2D4AQ9H788 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
SH2D4AQ9H788 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SH2D4AQ9H788 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SH2D4AQ9H788 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SH2D4AQ9H788 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SH2D4AQ9H788 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SH2D4AQ9H788 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SH2D4AQ9H788 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
SH2D4AQ9H788 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SH2D4AQ9H788 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.64■□□□□ 0.74
SH2D4AQ9H788 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SH2D4AQ9H788 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SH2D4AQ9H788 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.64■□□□□ 0.74
SH2D4AQ9H788 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SH2D4AQ9H788 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SH2D4AQ9H788 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SH2D4AQ9H788 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SH2D4AQ9H788 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SH2D4AQ9H788 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SH2D4AQ9H788 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.64■□□□□ 0.73
SH2D4AQ9H788 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.64■□□□□ 0.73
SH2D4AQ9H788 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.64■□□□□ 0.73
SH2D4AQ9H788 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.64■□□□□ 0.73
SH2D4AQ9H788 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.64■□□□□ 0.73
SH2D4AQ9H788 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.64■□□□□ 0.73
SH2D4AQ9H788 SPCS2P4-201ENST00000436160 681 ntBASIC19.64■□□□□ 0.73
SH2D4AQ9H788 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.64■□□□□ 0.73
SH2D4AQ9H788 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.64■□□□□ 0.73
SH2D4AQ9H788 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SH2D4AQ9H788 AC015911.4-201ENST00000588022 1070 ntBASIC19.64■□□□□ 0.73
SH2D4AQ9H788 AC011467.4-201ENST00000594891 528 ntBASIC19.64■□□□□ 0.73
SH2D4AQ9H788 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SH2D4AQ9H788 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.64■□□□□ 0.73
SH2D4AQ9H788 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SH2D4AQ9H788 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SH2D4AQ9H788 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SH2D4AQ9H788 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SH2D4AQ9H788 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.64■□□□□ 0.73
SH2D4AQ9H788 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SH2D4AQ9H788 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SH2D4AQ9H788 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH2D4AQ9H788 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH2D4AQ9H788 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.63■□□□□ 0.73
SH2D4AQ9H788 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH2D4AQ9H788 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.63■□□□□ 0.73
SH2D4AQ9H788 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.63■□□□□ 0.73
SH2D4AQ9H788 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH2D4AQ9H788 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.63■□□□□ 0.73
SH2D4AQ9H788 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH2D4AQ9H788 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.63■□□□□ 0.73
SH2D4AQ9H788 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
SH2D4AQ9H788 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH2D4AQ9H788 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH2D4AQ9H788 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.63■□□□□ 0.73
SH2D4AQ9H788 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SH2D4AQ9H788 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.63■□□□□ 0.73
SH2D4AQ9H788 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.63■□□□□ 0.73
SH2D4AQ9H788 AC069335.1-201ENST00000489972 472 ntBASIC19.63■□□□□ 0.73
SH2D4AQ9H788 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.63■□□□□ 0.73
SH2D4AQ9H788 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SH2D4AQ9H788 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH2D4AQ9H788 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.63■□□□□ 0.73
SH2D4AQ9H788 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH2D4AQ9H788 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms