Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
HDAC8Q9BY41 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HDAC8Q9BY41 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HDAC8Q9BY41 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
HDAC8Q9BY41 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HDAC8Q9BY41 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.72■□□□□ 0.27
HDAC8Q9BY41 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HDAC8Q9BY41 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.72■□□□□ 0.27
HDAC8Q9BY41 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.72■□□□□ 0.27
HDAC8Q9BY41 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.72■□□□□ 0.27
HDAC8Q9BY41 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.72■□□□□ 0.27
HDAC8Q9BY41 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.72■□□□□ 0.27
HDAC8Q9BY41 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.72■□□□□ 0.27
HDAC8Q9BY41 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
HDAC8Q9BY41 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HDAC8Q9BY41 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.72■□□□□ 0.27
HDAC8Q9BY41 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
HDAC8Q9BY41 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HDAC8Q9BY41 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.72■□□□□ 0.27
HDAC8Q9BY41 PCDHB17P-201ENST00000539533 2393 ntBASIC16.72■□□□□ 0.27
HDAC8Q9BY41 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HDAC8Q9BY41 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.71■□□□□ 0.27
HDAC8Q9BY41 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
HDAC8Q9BY41 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
HDAC8Q9BY41 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
HDAC8Q9BY41 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.71■□□□□ 0.27
HDAC8Q9BY41 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HDAC8Q9BY41 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HDAC8Q9BY41 MIR346-201ENST00000362234 95 ntBASIC16.71■□□□□ 0.27
HDAC8Q9BY41 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.71■□□□□ 0.27
HDAC8Q9BY41 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.71■□□□□ 0.27
HDAC8Q9BY41 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HDAC8Q9BY41 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HDAC8Q9BY41 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.71■□□□□ 0.27
HDAC8Q9BY41 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.71■□□□□ 0.27
HDAC8Q9BY41 KRT18P34-201ENST00000488218 1270 ntBASIC16.71■□□□□ 0.27
HDAC8Q9BY41 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.71■□□□□ 0.27
HDAC8Q9BY41 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.71■□□□□ 0.27
HDAC8Q9BY41 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.71■□□□□ 0.27
HDAC8Q9BY41 AL512356.2-201ENST00000546955 174 ntBASIC16.71■□□□□ 0.27
HDAC8Q9BY41 AC015911.4-201ENST00000588022 1070 ntBASIC16.71■□□□□ 0.27
HDAC8Q9BY41 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.71■□□□□ 0.27
HDAC8Q9BY41 AC027307.2-201ENST00000591252 911 ntBASIC16.71■□□□□ 0.27
HDAC8Q9BY41 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
HDAC8Q9BY41 AL139011.1-202ENST00000642063 584 ntBASIC16.71■□□□□ 0.27
HDAC8Q9BY41 AC090340.1-201ENST00000620778 4980 ntBASIC16.71■□□□□ 0.27
HDAC8Q9BY41 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HDAC8Q9BY41 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
HDAC8Q9BY41 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.71■□□□□ 0.27
HDAC8Q9BY41 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.71■□□□□ 0.27
HDAC8Q9BY41 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.71■□□□□ 0.27
HDAC8Q9BY41 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HDAC8Q9BY41 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.71■□□□□ 0.27
HDAC8Q9BY41 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HDAC8Q9BY41 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
HDAC8Q9BY41 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.71■□□□□ 0.27
HDAC8Q9BY41 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
HDAC8Q9BY41 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HDAC8Q9BY41 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
HDAC8Q9BY41 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
HDAC8Q9BY41 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.71■□□□□ 0.26
HDAC8Q9BY41 KRT8P39-201ENST00000396270 1433 ntBASIC16.7■□□□□ 0.26
HDAC8Q9BY41 UXT-AS1-201ENST00000590504 1525 ntBASIC16.7■□□□□ 0.26
HDAC8Q9BY41 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.7■□□□□ 0.26
HDAC8Q9BY41 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC8Q9BY41 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
HDAC8Q9BY41 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC8Q9BY41 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC8Q9BY41 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC8Q9BY41 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.7■□□□□ 0.26
HDAC8Q9BY41 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.7■□□□□ 0.26
HDAC8Q9BY41 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC8Q9BY41 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC8Q9BY41 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.7■□□□□ 0.26
HDAC8Q9BY41 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.7■□□□□ 0.26
HDAC8Q9BY41 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC8Q9BY41 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.7■□□□□ 0.26
HDAC8Q9BY41 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.7■□□□□ 0.26
HDAC8Q9BY41 GPS2P2-201ENST00000430745 888 ntBASIC16.7■□□□□ 0.26
HDAC8Q9BY41 HMGN1P19-201ENST00000436976 333 ntBASIC16.7■□□□□ 0.26
HDAC8Q9BY41 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.7■□□□□ 0.26
HDAC8Q9BY41 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.7■□□□□ 0.26
HDAC8Q9BY41 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC8Q9BY41 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.7■□□□□ 0.26
HDAC8Q9BY41 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.7■□□□□ 0.26
HDAC8Q9BY41 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HDAC8Q9BY41 AP001059.3-201ENST00000619053 235 ntBASIC16.7■□□□□ 0.26
HDAC8Q9BY41 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.7■□□□□ 0.26
HDAC8Q9BY41 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC8Q9BY41 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC8Q9BY41 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC8Q9BY41 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC8Q9BY41 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HDAC8Q9BY41 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC8Q9BY41 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC8Q9BY41 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HDAC8Q9BY41 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.69■□□□□ 0.26
HDAC8Q9BY41 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HDAC8Q9BY41 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.69■□□□□ 0.26
HDAC8Q9BY41 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms