Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LITAFQ99732 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
LITAFQ99732 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC11.26□□□□□ -0.61
LITAFQ99732 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
LITAFQ99732 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LITAFQ99732 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LITAFQ99732 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LITAFQ99732 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LITAFQ99732 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LITAFQ99732 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC11.26□□□□□ -0.61
LITAFQ99732 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LITAFQ99732 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LITAFQ99732 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
LITAFQ99732 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LITAFQ99732 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LITAFQ99732 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LITAFQ99732 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
LITAFQ99732 HIST1H2APS4-201ENST00000362070 348 ntBASIC11.26□□□□□ -0.61
LITAFQ99732 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LITAFQ99732 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
LITAFQ99732 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
LITAFQ99732 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
LITAFQ99732 AC007663.1-201ENST00000438948 1240 ntBASIC11.26□□□□□ -0.61
LITAFQ99732 CCR12P-201ENST00000446203 998 ntBASIC11.26□□□□□ -0.61
LITAFQ99732 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC11.26□□□□□ -0.61
LITAFQ99732 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC11.26□□□□□ -0.61
LITAFQ99732 RNA5SP413-201ENST00000516373 109 ntBASIC11.26□□□□□ -0.61
LITAFQ99732 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC11.26□□□□□ -0.61
LITAFQ99732 GRAP-204ENST00000573099 846 ntTSL 3 BASIC11.26□□□□□ -0.61
LITAFQ99732 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC11.26□□□□□ -0.61
LITAFQ99732 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC11.26□□□□□ -0.61
LITAFQ99732 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC11.26□□□□□ -0.61
LITAFQ99732 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC11.26□□□□□ -0.61
LITAFQ99732 AL109923.1-201ENST00000618799 583 ntBASIC11.26□□□□□ -0.61
LITAFQ99732 AL139011.1-202ENST00000642063 584 ntBASIC11.26□□□□□ -0.61
LITAFQ99732 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LITAFQ99732 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
LITAFQ99732 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
LITAFQ99732 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC11.26□□□□□ -0.61
LITAFQ99732 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LITAFQ99732 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC11.26□□□□□ -0.61
LITAFQ99732 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC11.26□□□□□ -0.61
LITAFQ99732 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LITAFQ99732 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
LITAFQ99732 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC11.26□□□□□ -0.61
LITAFQ99732 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LITAFQ99732 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
LITAFQ99732 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LITAFQ99732 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC11.26□□□□□ -0.61
LITAFQ99732 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
LITAFQ99732 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LITAFQ99732 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LITAFQ99732 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LITAFQ99732 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC11.26□□□□□ -0.61
LITAFQ99732 PRAL-201ENST00000624952 3286 ntBASIC11.26□□□□□ -0.61
LITAFQ99732 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
LITAFQ99732 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
LITAFQ99732 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LITAFQ99732 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
LITAFQ99732 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LITAFQ99732 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LITAFQ99732 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
LITAFQ99732 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LITAFQ99732 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LITAFQ99732 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LITAFQ99732 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LITAFQ99732 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LITAFQ99732 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC11.25□□□□□ -0.61
LITAFQ99732 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
LITAFQ99732 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LITAFQ99732 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
LITAFQ99732 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LITAFQ99732 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC11.25□□□□□ -0.61
LITAFQ99732 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LITAFQ99732 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LITAFQ99732 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC11.25□□□□□ -0.61
LITAFQ99732 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
LITAFQ99732 GAD2-202ENST00000376248 680 ntTSL 5 BASIC11.25□□□□□ -0.61
LITAFQ99732 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LITAFQ99732 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
LITAFQ99732 DDT-203ENST00000403754 569 ntTSL 3 BASIC11.25□□□□□ -0.61
LITAFQ99732 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LITAFQ99732 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC11.25□□□□□ -0.61
LITAFQ99732 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LITAFQ99732 DDT-206ENST00000430101 573 ntTSL 2 BASIC11.25□□□□□ -0.61
LITAFQ99732 AC009947.2-201ENST00000444014 672 ntBASIC11.25□□□□□ -0.61
LITAFQ99732 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LITAFQ99732 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LITAFQ99732 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC11.25□□□□□ -0.61
LITAFQ99732 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC11.25□□□□□ -0.61
LITAFQ99732 NT5C-210ENST00000582160 860 ntTSL 2 BASIC11.25□□□□□ -0.61
LITAFQ99732 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
LITAFQ99732 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LITAFQ99732 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LITAFQ99732 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
LITAFQ99732 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LITAFQ99732 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
LITAFQ99732 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LITAFQ99732 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
LITAFQ99732 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms