Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK5RAP2Q96SN8 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK5RAP2Q96SN8 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.66■□□□□ 0.74
CDK5RAP2Q96SN8 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.66■□□□□ 0.74
CDK5RAP2Q96SN8 IGHV3-62-201ENST00000520057 340 ntBASIC19.66■□□□□ 0.74
CDK5RAP2Q96SN8 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.66■□□□□ 0.74
CDK5RAP2Q96SN8 RARRES2P9-201ENST00000565168 469 ntBASIC19.66■□□□□ 0.74
CDK5RAP2Q96SN8 AL590560.3-201ENST00000623350 461 ntBASIC19.66■□□□□ 0.74
CDK5RAP2Q96SN8 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDK5RAP2Q96SN8 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.66■□□□□ 0.74
CDK5RAP2Q96SN8 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.66■□□□□ 0.74
CDK5RAP2Q96SN8 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.66■□□□□ 0.74
CDK5RAP2Q96SN8 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CDK5RAP2Q96SN8 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK5RAP2Q96SN8 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.66■□□□□ 0.74
CDK5RAP2Q96SN8 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.66■□□□□ 0.74
CDK5RAP2Q96SN8 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK5RAP2Q96SN8 GPAA1P2-202ENST00000606848 1787 ntBASIC19.66■□□□□ 0.74
CDK5RAP2Q96SN8 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDK5RAP2Q96SN8 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP2Q96SN8 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP2Q96SN8 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP2Q96SN8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP2Q96SN8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP2Q96SN8 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP2Q96SN8 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP2Q96SN8 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CDK5RAP2Q96SN8 AC236430.1-201ENST00000402231 743 ntBASIC19.65■□□□□ 0.74
CDK5RAP2Q96SN8 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.65■□□□□ 0.74
CDK5RAP2Q96SN8 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.65■□□□□ 0.74
CDK5RAP2Q96SN8 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
CDK5RAP2Q96SN8 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP2Q96SN8 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.65■□□□□ 0.74
CDK5RAP2Q96SN8 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CDK5RAP2Q96SN8 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.65■□□□□ 0.74
CDK5RAP2Q96SN8 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP2Q96SN8 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP2Q96SN8 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP2Q96SN8 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP2Q96SN8 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP2Q96SN8 AC005332.8-201ENST00000622750 2735 ntBASIC19.65■□□□□ 0.74
CDK5RAP2Q96SN8 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CDK5RAP2Q96SN8 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP2Q96SN8 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP2Q96SN8 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CDK5RAP2Q96SN8 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP2Q96SN8 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CDK5RAP2Q96SN8 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK5RAP2Q96SN8 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.65■□□□□ 0.74
CDK5RAP2Q96SN8 HLA-H-201ENST00000383620 1096 ntBASIC19.65■□□□□ 0.74
CDK5RAP2Q96SN8 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.65■□□□□ 0.74
CDK5RAP2Q96SN8 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.65■□□□□ 0.74
CDK5RAP2Q96SN8 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDK5RAP2Q96SN8 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDK5RAP2Q96SN8 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.64■□□□□ 0.74
CDK5RAP2Q96SN8 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CDK5RAP2Q96SN8 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
CDK5RAP2Q96SN8 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.64■□□□□ 0.73
CDK5RAP2Q96SN8 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDK5RAP2Q96SN8 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDK5RAP2Q96SN8 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDK5RAP2Q96SN8 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CDK5RAP2Q96SN8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.64■□□□□ 0.73
CDK5RAP2Q96SN8 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.64■□□□□ 0.73
CDK5RAP2Q96SN8 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDK5RAP2Q96SN8 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.64■□□□□ 0.73
CDK5RAP2Q96SN8 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC19.64■□□□□ 0.73
CDK5RAP2Q96SN8 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.64■□□□□ 0.73
CDK5RAP2Q96SN8 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.64■□□□□ 0.73
CDK5RAP2Q96SN8 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.64■□□□□ 0.73
CDK5RAP2Q96SN8 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.64■□□□□ 0.73
CDK5RAP2Q96SN8 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDK5RAP2Q96SN8 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.64■□□□□ 0.73
CDK5RAP2Q96SN8 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.64■□□□□ 0.73
CDK5RAP2Q96SN8 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.64■□□□□ 0.73
CDK5RAP2Q96SN8 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDK5RAP2Q96SN8 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDK5RAP2Q96SN8 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDK5RAP2Q96SN8 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDK5RAP2Q96SN8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CDK5RAP2Q96SN8 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.64■□□□□ 0.73
CDK5RAP2Q96SN8 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.63■□□□□ 0.73
CDK5RAP2Q96SN8 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDK5RAP2Q96SN8 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK5RAP2Q96SN8 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CDK5RAP2Q96SN8 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CDK5RAP2Q96SN8 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.63■□□□□ 0.73
CDK5RAP2Q96SN8 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.63■□□□□ 0.73
CDK5RAP2Q96SN8 AL133215.2-201ENST00000609242 977 ntBASIC19.63■□□□□ 0.73
CDK5RAP2Q96SN8 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDK5RAP2Q96SN8 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
CDK5RAP2Q96SN8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK5RAP2Q96SN8 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK5RAP2Q96SN8 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK5RAP2Q96SN8 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK5RAP2Q96SN8 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK5RAP2Q96SN8 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.63■□□□□ 0.73
CDK5RAP2Q96SN8 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.63■□□□□ 0.73
CDK5RAP2Q96SN8 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK5RAP2Q96SN8 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms