Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.07■□□□□ 0.16
BBS4Q96RK4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.07■□□□□ 0.16
BBS4Q96RK4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.07■□□□□ 0.16
BBS4Q96RK4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.07■□□□□ 0.16
BBS4Q96RK4 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
BBS4Q96RK4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BBS4Q96RK4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.07■□□□□ 0.16
BBS4Q96RK4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
BBS4Q96RK4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BBS4Q96RK4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.07■□□□□ 0.16
BBS4Q96RK4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.07■□□□□ 0.16
BBS4Q96RK4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.07■□□□□ 0.16
BBS4Q96RK4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
BBS4Q96RK4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BBS4Q96RK4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BBS4Q96RK4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.07■□□□□ 0.16
BBS4Q96RK4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BBS4Q96RK4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BBS4Q96RK4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.07■□□□□ 0.16
BBS4Q96RK4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.07■□□□□ 0.16
BBS4Q96RK4 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BBS4Q96RK4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BBS4Q96RK4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BBS4Q96RK4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BBS4Q96RK4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BBS4Q96RK4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
BBS4Q96RK4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBS4Q96RK4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
BBS4Q96RK4 AC099398.1-201ENST00000567919 2776 ntBASIC16.06■□□□□ 0.16
BBS4Q96RK4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
BBS4Q96RK4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BBS4Q96RK4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.06■□□□□ 0.16
BBS4Q96RK4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BBS4Q96RK4 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBS4Q96RK4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.06■□□□□ 0.16
BBS4Q96RK4 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
BBS4Q96RK4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBS4Q96RK4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.06■□□□□ 0.16
BBS4Q96RK4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
BBS4Q96RK4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBS4Q96RK4 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBS4Q96RK4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BBS4Q96RK4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBS4Q96RK4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.06■□□□□ 0.16
BBS4Q96RK4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.06■□□□□ 0.16
BBS4Q96RK4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.06■□□□□ 0.16
BBS4Q96RK4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.06■□□□□ 0.16
BBS4Q96RK4 AP002414.1-201ENST00000391405 1147 ntBASIC16.06■□□□□ 0.16
BBS4Q96RK4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.06■□□□□ 0.16
BBS4Q96RK4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.06■□□□□ 0.16
BBS4Q96RK4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.06■□□□□ 0.16
BBS4Q96RK4 AC021087.4-201ENST00000563761 564 ntBASIC16.06■□□□□ 0.16
BBS4Q96RK4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBS4Q96RK4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BBS4Q96RK4 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBS4Q96RK4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBS4Q96RK4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BBS4Q96RK4 AGGF1P2-201ENST00000426656 2106 ntBASIC16.06■□□□□ 0.16
BBS4Q96RK4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBS4Q96RK4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.06■□□□□ 0.16
BBS4Q96RK4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBS4Q96RK4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.06■□□□□ 0.16
BBS4Q96RK4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.06■□□□□ 0.16
BBS4Q96RK4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.05■□□□□ 0.16
BBS4Q96RK4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.05■□□□□ 0.16
BBS4Q96RK4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.05■□□□□ 0.16
BBS4Q96RK4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BBS4Q96RK4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
BBS4Q96RK4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.05■□□□□ 0.16
BBS4Q96RK4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.05■□□□□ 0.16
BBS4Q96RK4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BBS4Q96RK4 PCDHB17P-201ENST00000539533 2393 ntBASIC16.05■□□□□ 0.16
BBS4Q96RK4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
BBS4Q96RK4 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
BBS4Q96RK4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BBS4Q96RK4 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BBS4Q96RK4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
BBS4Q96RK4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BBS4Q96RK4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BBS4Q96RK4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.05■□□□□ 0.16
BBS4Q96RK4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
BBS4Q96RK4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
BBS4Q96RK4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.05■□□□□ 0.16
BBS4Q96RK4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
BBS4Q96RK4 TERC-201ENST00000602385 541 ntBASIC16.05■□□□□ 0.16
BBS4Q96RK4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.05■□□□□ 0.16
BBS4Q96RK4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BBS4Q96RK4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
BBS4Q96RK4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.05■□□□□ 0.16
BBS4Q96RK4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.05■□□□□ 0.16
BBS4Q96RK4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BBS4Q96RK4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.05■□□□□ 0.16
BBS4Q96RK4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BBS4Q96RK4 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
BBS4Q96RK4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
BBS4Q96RK4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.05■□□□□ 0.16
BBS4Q96RK4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BBS4Q96RK4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BBS4Q96RK4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
BBS4Q96RK4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms