Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 UBALD1-205ENST00000590891 2641 ntBASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 PMS2P1-201ENST00000431037 1228 ntBASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 AC079781.3-201ENST00000449110 356 ntBASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 AC005593.1-201ENST00000624894 515 ntBASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 FAM215A-202ENST00000632077 792 ntBASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 ME2P1-201ENST00000426028 1970 ntBASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDLIM5Q96HC4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 AP002414.3-201ENST00000589352 1468 ntBASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 AL512652.2-201ENST00000625156 1716 ntBASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 HCG4-201ENST00000418983 998 ntBASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 AC148477.8-201ENST00000624298 468 ntBASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 AC006449.5-201ENST00000610658 2098 ntBASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDLIM5Q96HC4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDLIM5Q96HC4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms