Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 DUX4L26-201ENST00000489078 1255 ntBASIC14.78□□□□□ -0.04
CPNE2Q96FN4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 AC011467.2-201ENST00000598425 242 ntBASIC14.78□□□□□ -0.04
CPNE2Q96FN4 Z69720.1-201ENST00000601483 472 ntBASIC14.78□□□□□ -0.04
CPNE2Q96FN4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE2Q96FN4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
CPNE2Q96FN4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CPNE2Q96FN4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.77□□□□□ -0.04
CPNE2Q96FN4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.77□□□□□ -0.04
CPNE2Q96FN4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CPNE2Q96FN4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CPNE2Q96FN4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CPNE2Q96FN4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CPNE2Q96FN4 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.77□□□□□ -0.04
CPNE2Q96FN4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CPNE2Q96FN4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CPNE2Q96FN4 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CPNE2Q96FN4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CPNE2Q96FN4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
CPNE2Q96FN4 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.77□□□□□ -0.04
CPNE2Q96FN4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.77□□□□□ -0.04
CPNE2Q96FN4 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.77□□□□□ -0.04
CPNE2Q96FN4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CPNE2Q96FN4 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CPNE2Q96FN4 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CPNE2Q96FN4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CPNE2Q96FN4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.77□□□□□ -0.04
CPNE2Q96FN4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CPNE2Q96FN4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
CPNE2Q96FN4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CPNE2Q96FN4 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
CPNE2Q96FN4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE2Q96FN4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE2Q96FN4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE2Q96FN4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.77□□□□□ -0.05
CPNE2Q96FN4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CPNE2Q96FN4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.77□□□□□ -0.05
CPNE2Q96FN4 AC104076.2-201ENST00000448912 469 ntBASIC14.77□□□□□ -0.05
CPNE2Q96FN4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.77□□□□□ -0.05
CPNE2Q96FN4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE2Q96FN4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.77□□□□□ -0.05
CPNE2Q96FN4 AL121956.5-201ENST00000625261 221 ntBASIC14.77□□□□□ -0.05
CPNE2Q96FN4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.77□□□□□ -0.05
CPNE2Q96FN4 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE2Q96FN4 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE2Q96FN4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE2Q96FN4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CPNE2Q96FN4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE2Q96FN4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE2Q96FN4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.77□□□□□ -0.05
CPNE2Q96FN4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE2Q96FN4 PCDHA14-201ENST00000506751 2298 ntBASIC14.77□□□□□ -0.05
CPNE2Q96FN4 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.77□□□□□ -0.05
CPNE2Q96FN4 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE2Q96FN4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CPNE2Q96FN4 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE2Q96FN4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE2Q96FN4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.77□□□□□ -0.05
CPNE2Q96FN4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE2Q96FN4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE2Q96FN4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE2Q96FN4 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CPNE2Q96FN4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE2Q96FN4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.77□□□□□ -0.05
CPNE2Q96FN4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CPNE2Q96FN4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE2Q96FN4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE2Q96FN4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE2Q96FN4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE2Q96FN4 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE2Q96FN4 AC092053.1-201ENST00000605787 1936 ntBASIC14.76□□□□□ -0.05
CPNE2Q96FN4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE2Q96FN4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE2Q96FN4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE2Q96FN4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.76□□□□□ -0.05
CPNE2Q96FN4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.76□□□□□ -0.05
CPNE2Q96FN4 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.76□□□□□ -0.05
CPNE2Q96FN4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.76□□□□□ -0.05
CPNE2Q96FN4 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CPNE2Q96FN4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CPNE2Q96FN4 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms