Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AC022144.1-201ENST00000602255 1580 ntBASIC15.15■□□□□ 0.02
SNRNP40Q96DI7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNRNP40Q96DI7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SNRNP40Q96DI7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.14■□□□□ 0.01
SNRNP40Q96DI7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
SNRNP40Q96DI7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SNRNP40Q96DI7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.14■□□□□ 0.01
SNRNP40Q96DI7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.14■□□□□ 0.01
SNRNP40Q96DI7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SNRNP40Q96DI7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.14■□□□□ 0.01
SNRNP40Q96DI7 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.14■□□□□ 0.01
SNRNP40Q96DI7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SNRNP40Q96DI7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNRNP40Q96DI7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNRNP40Q96DI7 COX5BP8-201ENST00000416911 349 ntBASIC15.14■□□□□ 0.01
SNRNP40Q96DI7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.14■□□□□ 0.01
SNRNP40Q96DI7 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.14■□□□□ 0.01
SNRNP40Q96DI7 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
SNRNP40Q96DI7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SNRNP40Q96DI7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.14■□□□□ 0.01
SNRNP40Q96DI7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.14■□□□□ 0.01
SNRNP40Q96DI7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNRNP40Q96DI7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
SNRNP40Q96DI7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SNRNP40Q96DI7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SNRNP40Q96DI7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SNRNP40Q96DI7 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNRNP40Q96DI7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
SNRNP40Q96DI7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.14■□□□□ 0.01
SNRNP40Q96DI7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNRNP40Q96DI7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SNRNP40Q96DI7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
SNRNP40Q96DI7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 RARRES2P9-201ENST00000565168 469 ntBASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 SPDYE12P-201ENST00000618416 771 ntBASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 PKD1P1-201ENST00000458669 6805 ntBASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SNRNP40Q96DI7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNRNP40Q96DI7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SNRNP40Q96DI7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNRNP40Q96DI7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
SNRNP40Q96DI7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNRNP40Q96DI7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.12■□□□□ 0.01
SNRNP40Q96DI7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.12■□□□□ 0.01
SNRNP40Q96DI7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.12■□□□□ 0.01
SNRNP40Q96DI7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNRNP40Q96DI7 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.12■□□□□ 0.01
SNRNP40Q96DI7 AP3S2-216ENST00000617003 1561 ntBASIC15.12■□□□□ 0.01
SNRNP40Q96DI7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNRNP40Q96DI7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SNRNP40Q96DI7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SNRNP40Q96DI7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SNRNP40Q96DI7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SNRNP40Q96DI7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SNRNP40Q96DI7 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SNRNP40Q96DI7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNRNP40Q96DI7 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.12■□□□□ 0.01
SNRNP40Q96DI7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.12■□□□□ 0.01
SNRNP40Q96DI7 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNRNP40Q96DI7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SNRNP40Q96DI7 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.12■□□□□ 0.01
SNRNP40Q96DI7 AL138828.2-201ENST00000615812 383 ntBASIC15.12■□□□□ 0.01
SNRNP40Q96DI7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SNRNP40Q96DI7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SNRNP40Q96DI7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SNRNP40Q96DI7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNRNP40Q96DI7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.12■□□□□ 0.01
SNRNP40Q96DI7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms