Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHD5Q8TDI0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHD5Q8TDI0 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.98■□□□□ 0.31
CHD5Q8TDI0 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.98■□□□□ 0.31
CHD5Q8TDI0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.98■□□□□ 0.31
CHD5Q8TDI0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHD5Q8TDI0 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.98■□□□□ 0.31
CHD5Q8TDI0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.98■□□□□ 0.31
CHD5Q8TDI0 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.98■□□□□ 0.31
CHD5Q8TDI0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.98■□□□□ 0.31
CHD5Q8TDI0 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.98■□□□□ 0.31
CHD5Q8TDI0 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.98■□□□□ 0.31
CHD5Q8TDI0 AL161645.1-201ENST00000622716 1255 ntBASIC16.98■□□□□ 0.31
CHD5Q8TDI0 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.98■□□□□ 0.31
CHD5Q8TDI0 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.98■□□□□ 0.31
CHD5Q8TDI0 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHD5Q8TDI0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.98■□□□□ 0.31
CHD5Q8TDI0 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CHD5Q8TDI0 PRORSD1P-202ENST00000563365 2154 ntBASIC16.98■□□□□ 0.31
CHD5Q8TDI0 PCDHA12-202ENST00000613593 2588 ntBASIC16.98■□□□□ 0.31
CHD5Q8TDI0 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHD5Q8TDI0 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHD5Q8TDI0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHD5Q8TDI0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.98■□□□□ 0.31
CHD5Q8TDI0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 GPAA1P2-202ENST00000606848 1787 ntBASIC16.97■□□□□ 0.31
CHD5Q8TDI0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 AL512652.2-201ENST00000625156 1716 ntBASIC16.97■□□□□ 0.31
CHD5Q8TDI0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 AC004461.1-201ENST00000412461 403 ntBASIC16.97■□□□□ 0.31
CHD5Q8TDI0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.97■□□□□ 0.31
CHD5Q8TDI0 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.96■□□□□ 0.31
CHD5Q8TDI0 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHD5Q8TDI0 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHD5Q8TDI0 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHD5Q8TDI0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHD5Q8TDI0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
CHD5Q8TDI0 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
CHD5Q8TDI0 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
CHD5Q8TDI0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHD5Q8TDI0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHD5Q8TDI0 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHD5Q8TDI0 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHD5Q8TDI0 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHD5Q8TDI0 UBALD1-205ENST00000590891 2641 ntBASIC16.96■□□□□ 0.31
CHD5Q8TDI0 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
CHD5Q8TDI0 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHD5Q8TDI0 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHD5Q8TDI0 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHD5Q8TDI0 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.96■□□□□ 0.31
CHD5Q8TDI0 AL355306.1-201ENST00000415580 579 ntBASIC16.96■□□□□ 0.31
CHD5Q8TDI0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.96■□□□□ 0.31
CHD5Q8TDI0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.96■□□□□ 0.31
CHD5Q8TDI0 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.96■□□□□ 0.31
CHD5Q8TDI0 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHD5Q8TDI0 AC134684.3-201ENST00000641758 218 ntBASIC16.96■□□□□ 0.31
CHD5Q8TDI0 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHD5Q8TDI0 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.96■□□□□ 0.31
CHD5Q8TDI0 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.96■□□□□ 0.31
CHD5Q8TDI0 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.96■□□□□ 0.31
CHD5Q8TDI0 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHD5Q8TDI0 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHD5Q8TDI0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms