Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 AC141586.5-201ENST00000624546 2050 ntBASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 MIR943-201ENST00000401286 94 ntBASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 KLF2P3-201ENST00000451977 1087 ntBASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 IGHV3-62-201ENST00000520057 340 ntBASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 LINC01225-203ENST00000563550 1244 ntBASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 AL645608.8-201ENST00000606034 2086 ntBASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
COLGALT1Q8NBJ5 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COLGALT1Q8NBJ5 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COLGALT1Q8NBJ5 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.17■□□□□ 0.5
COLGALT1Q8NBJ5 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
COLGALT1Q8NBJ5 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
COLGALT1Q8NBJ5 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COLGALT1Q8NBJ5 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
COLGALT1Q8NBJ5 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COLGALT1Q8NBJ5 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COLGALT1Q8NBJ5 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
COLGALT1Q8NBJ5 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
COLGALT1Q8NBJ5 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COLGALT1Q8NBJ5 BASP1P1-201ENST00000430708 665 ntBASIC18.17■□□□□ 0.5
COLGALT1Q8NBJ5 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COLGALT1Q8NBJ5 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COLGALT1Q8NBJ5 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.17■□□□□ 0.5
COLGALT1Q8NBJ5 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.17■□□□□ 0.5
COLGALT1Q8NBJ5 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.17■□□□□ 0.5
COLGALT1Q8NBJ5 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.17■□□□□ 0.5
COLGALT1Q8NBJ5 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
COLGALT1Q8NBJ5 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COLGALT1Q8NBJ5 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COLGALT1Q8NBJ5 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COLGALT1Q8NBJ5 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COLGALT1Q8NBJ5 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.17■□□□□ 0.5
COLGALT1Q8NBJ5 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.17■□□□□ 0.5
COLGALT1Q8NBJ5 UXT-AS1-201ENST00000590504 1525 ntBASIC18.17■□□□□ 0.5
COLGALT1Q8NBJ5 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
COLGALT1Q8NBJ5 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COLGALT1Q8NBJ5 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COLGALT1Q8NBJ5 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COLGALT1Q8NBJ5 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.17■□□□□ 0.5
COLGALT1Q8NBJ5 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COLGALT1Q8NBJ5 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.16■□□□□ 0.5
COLGALT1Q8NBJ5 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COLGALT1Q8NBJ5 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COLGALT1Q8NBJ5 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
COLGALT1Q8NBJ5 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COLGALT1Q8NBJ5 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COLGALT1Q8NBJ5 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COLGALT1Q8NBJ5 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COLGALT1Q8NBJ5 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
COLGALT1Q8NBJ5 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.16■□□□□ 0.5
COLGALT1Q8NBJ5 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COLGALT1Q8NBJ5 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.16■□□□□ 0.5
COLGALT1Q8NBJ5 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.16■□□□□ 0.5
COLGALT1Q8NBJ5 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COLGALT1Q8NBJ5 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.16■□□□□ 0.5
COLGALT1Q8NBJ5 AC107890.1-201ENST00000422478 521 ntBASIC18.16■□□□□ 0.5
COLGALT1Q8NBJ5 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.16■□□□□ 0.5
COLGALT1Q8NBJ5 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COLGALT1Q8NBJ5 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.16■□□□□ 0.5
COLGALT1Q8NBJ5 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COLGALT1Q8NBJ5 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COLGALT1Q8NBJ5 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.16■□□□□ 0.5
COLGALT1Q8NBJ5 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms