Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 AC012569.1-201ENST00000591191 1524 ntBASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 HCG4-201ENST00000418983 998 ntBASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 POLD2P1-201ENST00000511220 997 ntBASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 AC087641.1-201ENST00000557561 1021 ntBASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 AL139011.1-202ENST00000642063 584 ntBASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 AL671710.1-201ENST00000610245 2349 ntBASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZIC4Q8N9L1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 HMGA1P7-201ENST00000406908 502 ntBASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 PGAM5P1-201ENST00000518923 814 ntBASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 KRT19P2-202ENST00000557173 1012 ntBASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 AC023141.13-201ENST00000604991 943 ntBASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 AL645728.2-201ENST00000641974 660 ntBASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 AC092865.6-201ENST00000642101 219 ntBASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC4Q8N9L1 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms