Protein–RNA interactions for Protein: Q8N5Y2

MSL3, Male-specific lethal 3 homolog, humanhuman

Known RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3Q8N5Y2 DUX4L17-201ENST00000557360 1267 ntBASIC19.25■□□□□ 0.67
MSL3Q8N5Y2 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
MSL3Q8N5Y2 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.25■□□□□ 0.67
MSL3Q8N5Y2 AL390955.2-201ENST00000603032 514 ntBASIC19.25■□□□□ 0.67
MSL3Q8N5Y2 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MSL3Q8N5Y2 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
MSL3Q8N5Y2 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MSL3Q8N5Y2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
MSL3Q8N5Y2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.25■□□□□ 0.67
MSL3Q8N5Y2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
MSL3Q8N5Y2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.25■□□□□ 0.67
MSL3Q8N5Y2 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
MSL3Q8N5Y2 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
MSL3Q8N5Y2 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MSL3Q8N5Y2 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 AL353732.1-201ENST00000569618 1459 ntBASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 FAM58DP-201ENST00000428076 619 ntBASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 GPS2P2-201ENST00000430745 888 ntBASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 LINC01225-203ENST00000563550 1244 ntBASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 MIR4745-201ENST00000577608 62 ntBASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MSL3Q8N5Y2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
MSL3Q8N5Y2 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MSL3Q8N5Y2 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MSL3Q8N5Y2 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.23■□□□□ 0.67
MSL3Q8N5Y2 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MSL3Q8N5Y2 PMS2P4-201ENST00000412466 1052 ntBASIC19.23■□□□□ 0.67
MSL3Q8N5Y2 HCG4-201ENST00000418983 998 ntBASIC19.23■□□□□ 0.67
MSL3Q8N5Y2 SPCS2P4-201ENST00000436160 681 ntBASIC19.23■□□□□ 0.67
MSL3Q8N5Y2 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.23■□□□□ 0.67
MSL3Q8N5Y2 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.23■□□□□ 0.67
MSL3Q8N5Y2 DUX4L27-201ENST00000554796 1261 ntBASIC19.23■□□□□ 0.67
MSL3Q8N5Y2 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.23■□□□□ 0.67
MSL3Q8N5Y2 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MSL3Q8N5Y2 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.23■□□□□ 0.67
MSL3Q8N5Y2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MSL3Q8N5Y2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MSL3Q8N5Y2 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
MSL3Q8N5Y2 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MSL3Q8N5Y2 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MSL3Q8N5Y2 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.23■□□□□ 0.67
MSL3Q8N5Y2 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MSL3Q8N5Y2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
MSL3Q8N5Y2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.23■□□□□ 0.67
MSL3Q8N5Y2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MSL3Q8N5Y2 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
MSL3Q8N5Y2 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.23■□□□□ 0.67
MSL3Q8N5Y2 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MSL3Q8N5Y2 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MSL3Q8N5Y2 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.22■□□□□ 0.67
MSL3Q8N5Y2 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.22■□□□□ 0.67
MSL3Q8N5Y2 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MSL3Q8N5Y2 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MSL3Q8N5Y2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MSL3Q8N5Y2 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MSL3Q8N5Y2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MSL3Q8N5Y2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
MSL3Q8N5Y2 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MSL3Q8N5Y2 AL391005.1-201ENST00000623953 2435 ntBASIC19.22■□□□□ 0.67
MSL3Q8N5Y2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.22■□□□□ 0.67
MSL3Q8N5Y2 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.22■□□□□ 0.67
MSL3Q8N5Y2 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MSL3Q8N5Y2 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.22■□□□□ 0.67
MSL3Q8N5Y2 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.22■□□□□ 0.67
MSL3Q8N5Y2 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
MSL3Q8N5Y2 AC055876.3-201ENST00000431496 288 ntBASIC19.22■□□□□ 0.67
MSL3Q8N5Y2 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MSL3Q8N5Y2 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.22■□□□□ 0.67
MSL3Q8N5Y2 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.22■□□□□ 0.67
MSL3Q8N5Y2 MIR3909-201ENST00000579518 119 ntBASIC19.22■□□□□ 0.67
MSL3Q8N5Y2 AC138649.4-201ENST00000612222 287 ntBASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms