Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIX5Q8N196 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.29■□□□□ 0.36
SIX5Q8N196 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SIX5Q8N196 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.29■□□□□ 0.36
SIX5Q8N196 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SIX5Q8N196 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.29■□□□□ 0.36
SIX5Q8N196 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIX5Q8N196 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SIX5Q8N196 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIX5Q8N196 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SIX5Q8N196 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIX5Q8N196 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIX5Q8N196 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SIX5Q8N196 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIX5Q8N196 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIX5Q8N196 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIX5Q8N196 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIX5Q8N196 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SIX5Q8N196 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIX5Q8N196 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.28■□□□□ 0.36
SIX5Q8N196 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SIX5Q8N196 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIX5Q8N196 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
SIX5Q8N196 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.28■□□□□ 0.36
SIX5Q8N196 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIX5Q8N196 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIX5Q8N196 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SIX5Q8N196 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.28■□□□□ 0.36
SIX5Q8N196 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.28■□□□□ 0.36
SIX5Q8N196 TSSK5P-201ENST00000423978 907 ntBASIC17.28■□□□□ 0.36
SIX5Q8N196 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.28■□□□□ 0.36
SIX5Q8N196 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.28■□□□□ 0.36
SIX5Q8N196 U91328.1-201ENST00000437528 223 ntBASIC17.28■□□□□ 0.36
SIX5Q8N196 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIX5Q8N196 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.28■□□□□ 0.36
SIX5Q8N196 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.28■□□□□ 0.36
SIX5Q8N196 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.28■□□□□ 0.36
SIX5Q8N196 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.28■□□□□ 0.36
SIX5Q8N196 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.28■□□□□ 0.36
SIX5Q8N196 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SIX5Q8N196 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.28■□□□□ 0.36
SIX5Q8N196 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SIX5Q8N196 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.28■□□□□ 0.36
SIX5Q8N196 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SIX5Q8N196 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SIX5Q8N196 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.28■□□□□ 0.36
SIX5Q8N196 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIX5Q8N196 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIX5Q8N196 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.28■□□□□ 0.36
SIX5Q8N196 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SIX5Q8N196 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SIX5Q8N196 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.27■□□□□ 0.36
SIX5Q8N196 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SIX5Q8N196 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SIX5Q8N196 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SIX5Q8N196 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SIX5Q8N196 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.27■□□□□ 0.36
SIX5Q8N196 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SIX5Q8N196 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SIX5Q8N196 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SIX5Q8N196 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.27■□□□□ 0.36
SIX5Q8N196 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SIX5Q8N196 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.27■□□□□ 0.36
SIX5Q8N196 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
SIX5Q8N196 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SIX5Q8N196 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SIX5Q8N196 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SIX5Q8N196 MIR346-201ENST00000362234 95 ntBASIC17.27■□□□□ 0.36
SIX5Q8N196 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SIX5Q8N196 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SIX5Q8N196 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SIX5Q8N196 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SIX5Q8N196 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.27■□□□□ 0.36
SIX5Q8N196 SPTLC1P1-201ENST00000447199 261 ntBASIC17.27■□□□□ 0.36
SIX5Q8N196 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.27■□□□□ 0.36
SIX5Q8N196 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.27■□□□□ 0.36
SIX5Q8N196 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.27■□□□□ 0.36
SIX5Q8N196 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.27■□□□□ 0.36
SIX5Q8N196 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SIX5Q8N196 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SIX5Q8N196 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.27■□□□□ 0.36
SIX5Q8N196 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SIX5Q8N196 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SIX5Q8N196 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SIX5Q8N196 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
SIX5Q8N196 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SIX5Q8N196 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SIX5Q8N196 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SIX5Q8N196 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.27■□□□□ 0.35
SIX5Q8N196 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SIX5Q8N196 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SIX5Q8N196 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIX5Q8N196 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIX5Q8N196 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.26■□□□□ 0.35
SIX5Q8N196 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIX5Q8N196 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIX5Q8N196 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIX5Q8N196 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SIX5Q8N196 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.26■□□□□ 0.35
SIX5Q8N196 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms