Protein–RNA interactions for Protein: Q8IWA5

SLC44A2, Choline transporter-like protein 2, humanhuman

Predicted RBP Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A2Q8IWA5 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 FLJ38576-201ENST00000623820 2459 ntBASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 AP001269.4-201ENST00000609611 512 ntBASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC44A2Q8IWA5 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 AP005117.1-201ENST00000584346 1413 ntBASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 PCDHB19P-201ENST00000570871 2371 ntBASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC44A2Q8IWA5 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SLC44A2Q8IWA5 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.14■□□□□ 0.18
SLC44A2Q8IWA5 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SLC44A2Q8IWA5 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
SLC44A2Q8IWA5 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC44A2Q8IWA5 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC44A2Q8IWA5 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC44A2Q8IWA5 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC44A2Q8IWA5 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC44A2Q8IWA5 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
SLC44A2Q8IWA5 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
SLC44A2Q8IWA5 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms