Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 AC087499.1-201ENST00000418141 1075 ntBASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 AC117947.1-201ENST00000427448 529 ntBASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 HOMER2P1-201ENST00000455653 964 ntBASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 RN7SL606P-201ENST00000472779 293 ntBASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 AC124864.1-201ENST00000623408 392 ntBASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 LINC00554-201ENST00000564841 3011 ntBASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.86■□□□□ 0.29
NUDCD3Q8IVD9 AL365203.3-201ENST00000609742 2057 ntBASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 AC003669.1-201ENST00000334569 611 ntBASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 TSPY5P-201ENST00000426936 936 ntBASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 AC005336.2-201ENST00000593183 939 ntBASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 AL353801.3-201ENST00000609898 542 ntBASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 HYMAI.1-201ENST00000620949 238 ntBASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.85■□□□□ 0.29
NUDCD3Q8IVD9 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.84■□□□□ 0.29
NUDCD3Q8IVD9 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUDCD3Q8IVD9 ME2P1-201ENST00000426028 1970 ntBASIC16.84■□□□□ 0.29
NUDCD3Q8IVD9 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUDCD3Q8IVD9 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUDCD3Q8IVD9 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUDCD3Q8IVD9 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUDCD3Q8IVD9 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUDCD3Q8IVD9 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUDCD3Q8IVD9 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.84■□□□□ 0.29
NUDCD3Q8IVD9 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
NUDCD3Q8IVD9 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUDCD3Q8IVD9 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUDCD3Q8IVD9 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUDCD3Q8IVD9 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.84■□□□□ 0.29
NUDCD3Q8IVD9 AL137013.1-201ENST00000432946 1228 ntBASIC16.84■□□□□ 0.29
NUDCD3Q8IVD9 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.84■□□□□ 0.29
NUDCD3Q8IVD9 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.84■□□□□ 0.29
NUDCD3Q8IVD9 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms