Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 AC012313.10-201ENST00000623509 926 ntBASIC17.63■□□□□ 0.41
RFX6Q8HWS3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 AL603756.1-201ENST00000606511 2163 ntBASIC17.62■□□□□ 0.41
RFX6Q8HWS3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 LINC01711-201ENST00000598340 967 ntBASIC17.62■□□□□ 0.41
RFX6Q8HWS3 MTDHP4-201ENST00000600287 670 ntBASIC17.62■□□□□ 0.41
RFX6Q8HWS3 TERC-201ENST00000602385 541 ntBASIC17.62■□□□□ 0.41
RFX6Q8HWS3 AL139424.1-201ENST00000607572 797 ntBASIC17.62■□□□□ 0.41
RFX6Q8HWS3 AL589182.2-201ENST00000619332 1049 ntBASIC17.62■□□□□ 0.41
RFX6Q8HWS3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 AL391256.1-201ENST00000443260 1855 ntBASIC17.62■□□□□ 0.41
RFX6Q8HWS3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFX6Q8HWS3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFX6Q8HWS3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFX6Q8HWS3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RFX6Q8HWS3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RFX6Q8HWS3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFX6Q8HWS3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.61■□□□□ 0.41
RFX6Q8HWS3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RFX6Q8HWS3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.61■□□□□ 0.41
RFX6Q8HWS3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.61■□□□□ 0.41
RFX6Q8HWS3 AC139887.3-201ENST00000568585 713 ntBASIC17.61■□□□□ 0.41
RFX6Q8HWS3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.61■□□□□ 0.41
RFX6Q8HWS3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFX6Q8HWS3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.61■□□□□ 0.41
RFX6Q8HWS3 REXO1L6P-202ENST00000619970 1078 ntBASIC17.61■□□□□ 0.41
RFX6Q8HWS3 NFIC-211ENST00000641145 8399 ntBASIC17.61■□□□□ 0.41
RFX6Q8HWS3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFX6Q8HWS3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFX6Q8HWS3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RFX6Q8HWS3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFX6Q8HWS3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.61■□□□□ 0.41
RFX6Q8HWS3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.61■□□□□ 0.41
RFX6Q8HWS3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFX6Q8HWS3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFX6Q8HWS3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFX6Q8HWS3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
RFX6Q8HWS3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
RFX6Q8HWS3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFX6Q8HWS3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.6■□□□□ 0.41
RFX6Q8HWS3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.6■□□□□ 0.41
RFX6Q8HWS3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RFX6Q8HWS3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFX6Q8HWS3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
RFX6Q8HWS3 AKR1C7P-201ENST00000305623 895 ntBASIC17.6■□□□□ 0.41
RFX6Q8HWS3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.6■□□□□ 0.41
RFX6Q8HWS3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFX6Q8HWS3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.6■□□□□ 0.41
RFX6Q8HWS3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFX6Q8HWS3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.6■□□□□ 0.41
RFX6Q8HWS3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.6■□□□□ 0.41
RFX6Q8HWS3 SCARNA2-201ENST00000458748 420 ntBASIC17.6■□□□□ 0.41
RFX6Q8HWS3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms