Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC20.88■□□□□ 0.93
CHD1LQ86WJ1 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHD1LQ86WJ1 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHD1LQ86WJ1 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.88■□□□□ 0.93
CHD1LQ86WJ1 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHD1LQ86WJ1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHD1LQ86WJ1 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHD1LQ86WJ1 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHD1LQ86WJ1 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHD1LQ86WJ1 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHD1LQ86WJ1 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 RPS2P1-201ENST00000434010 821 ntBASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CHD1LQ86WJ1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 CYP2T1P-202ENST00000641596 2535 ntBASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 AC005052.1-201ENST00000625181 2492 ntBASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 ME2P1-201ENST00000426028 1970 ntBASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHD1LQ86WJ1 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 RPS15P9-201ENST00000494093 319 ntBASIC20.85■□□□□ 0.93
CHD1LQ86WJ1 TP73-AS1-207ENST00000624167 988 ntBASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms