Protein–RNA interactions for Protein: Q6UXM1

LRIG3, Leucine-rich repeats and immunoglobulin-like domains protein 3, humanhuman

Predictions only

Length 1,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIG3Q6UXM1 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LRIG3Q6UXM1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.28■□□□□ 0.36
LRIG3Q6UXM1 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIG3Q6UXM1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LRIG3Q6UXM1 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIG3Q6UXM1 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIG3Q6UXM1 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
LRIG3Q6UXM1 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
LRIG3Q6UXM1 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LRIG3Q6UXM1 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRIG3Q6UXM1 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
LRIG3Q6UXM1 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRIG3Q6UXM1 AC009336.1-201ENST00000608941 1553 ntBASIC17.28■□□□□ 0.36
LRIG3Q6UXM1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIG3Q6UXM1 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.27■□□□□ 0.36
LRIG3Q6UXM1 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRIG3Q6UXM1 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRIG3Q6UXM1 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.27■□□□□ 0.36
LRIG3Q6UXM1 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
LRIG3Q6UXM1 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRIG3Q6UXM1 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LRIG3Q6UXM1 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
LRIG3Q6UXM1 AL136379.1-201ENST00000623471 2642 ntBASIC17.27■□□□□ 0.36
LRIG3Q6UXM1 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRIG3Q6UXM1 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRIG3Q6UXM1 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
LRIG3Q6UXM1 CYP2D8P-201ENST00000433633 1490 ntBASIC17.27■□□□□ 0.36
LRIG3Q6UXM1 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRIG3Q6UXM1 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRIG3Q6UXM1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRIG3Q6UXM1 HMGA1P5-201ENST00000412453 271 ntBASIC17.27■□□□□ 0.36
LRIG3Q6UXM1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.27■□□□□ 0.36
LRIG3Q6UXM1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRIG3Q6UXM1 FAM87A-204ENST00000613235 858 ntBASIC17.27■□□□□ 0.36
LRIG3Q6UXM1 AC010947.1-201ENST00000623454 693 ntBASIC17.27■□□□□ 0.36
LRIG3Q6UXM1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRIG3Q6UXM1 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.27■□□□□ 0.36
LRIG3Q6UXM1 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.27■□□□□ 0.36
LRIG3Q6UXM1 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRIG3Q6UXM1 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.27■□□□□ 0.35
LRIG3Q6UXM1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
LRIG3Q6UXM1 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRIG3Q6UXM1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.27■□□□□ 0.35
LRIG3Q6UXM1 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.35
LRIG3Q6UXM1 GGT4P-201ENST00000623672 1708 ntBASIC17.27■□□□□ 0.35
LRIG3Q6UXM1 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.27■□□□□ 0.35
LRIG3Q6UXM1 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRIG3Q6UXM1 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.27■□□□□ 0.35
LRIG3Q6UXM1 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.27■□□□□ 0.35
LRIG3Q6UXM1 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LRIG3Q6UXM1 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LRIG3Q6UXM1 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRIG3Q6UXM1 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LRIG3Q6UXM1 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRIG3Q6UXM1 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRIG3Q6UXM1 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 AL596275.1-201ENST00000423464 877 ntBASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 ECEL1P3-201ENST00000427961 737 ntBASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 AC073347.1-201ENST00000421633 2643 ntBASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 GGT3P-204ENST00000453783 1664 ntBASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.26■□□□□ 0.35
LRIG3Q6UXM1 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms