Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 TNRC18P2-201ENST00000417666 2714 ntBASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 AL109659.2-201ENST00000606809 1674 ntBASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 AC104692.2-201ENST00000603054 253 ntBASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
FOXR1Q6PIV2 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
FOXR1Q6PIV2 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.71■□□□□ 0.42
FOXR1Q6PIV2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.7■□□□□ 0.42
FOXR1Q6PIV2 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.7■□□□□ 0.42
FOXR1Q6PIV2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.7■□□□□ 0.42
FOXR1Q6PIV2 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FOXR1Q6PIV2 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FOXR1Q6PIV2 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.7■□□□□ 0.42
FOXR1Q6PIV2 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXR1Q6PIV2 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FOXR1Q6PIV2 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXR1Q6PIV2 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXR1Q6PIV2 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXR1Q6PIV2 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXR1Q6PIV2 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.7■□□□□ 0.42
FOXR1Q6PIV2 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.7■□□□□ 0.42
FOXR1Q6PIV2 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.7■□□□□ 0.42
FOXR1Q6PIV2 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.7■□□□□ 0.42
FOXR1Q6PIV2 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.7■□□□□ 0.42
FOXR1Q6PIV2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
FOXR1Q6PIV2 Z69720.1-201ENST00000601483 472 ntBASIC17.7■□□□□ 0.42
FOXR1Q6PIV2 GPALPP1-207ENST00000611650 899 ntBASIC17.7■□□□□ 0.42
FOXR1Q6PIV2 AC124864.1-201ENST00000623408 392 ntBASIC17.7■□□□□ 0.42
FOXR1Q6PIV2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXR1Q6PIV2 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXR1Q6PIV2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.7■□□□□ 0.42
FOXR1Q6PIV2 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
FOXR1Q6PIV2 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXR1Q6PIV2 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXR1Q6PIV2 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.7■□□□□ 0.42
FOXR1Q6PIV2 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
FOXR1Q6PIV2 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms