Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 ARMC10P1-201ENST00000313754 855 ntBASIC17.31■□□□□ 0.36
CASC4Q6P4E1 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 ACTG1P4-201ENST00000425123 1122 ntBASIC17.31■□□□□ 0.36
CASC4Q6P4E1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 NUS1P1-201ENST00000446295 882 ntBASIC17.31■□□□□ 0.36
CASC4Q6P4E1 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 AC138894.3-201ENST00000603787 634 ntBASIC17.31■□□□□ 0.36
CASC4Q6P4E1 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CASC4Q6P4E1 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CASC4Q6P4E1 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.3■□□□□ 0.36
CASC4Q6P4E1 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CASC4Q6P4E1 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.3■□□□□ 0.36
CASC4Q6P4E1 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CASC4Q6P4E1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CASC4Q6P4E1 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CASC4Q6P4E1 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CASC4Q6P4E1 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CASC4Q6P4E1 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CASC4Q6P4E1 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CASC4Q6P4E1 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CASC4Q6P4E1 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CASC4Q6P4E1 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.3■□□□□ 0.36
CASC4Q6P4E1 ABCD1P5-201ENST00000445663 754 ntBASIC17.3■□□□□ 0.36
CASC4Q6P4E1 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.3■□□□□ 0.36
CASC4Q6P4E1 MIR5100-201ENST00000579544 119 ntBASIC17.3■□□□□ 0.36
CASC4Q6P4E1 AL591684.3-201ENST00000605187 298 ntBASIC17.3■□□□□ 0.36
CASC4Q6P4E1 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.3■□□□□ 0.36
CASC4Q6P4E1 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.3■□□□□ 0.36
CASC4Q6P4E1 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CASC4Q6P4E1 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CASC4Q6P4E1 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CASC4Q6P4E1 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.3■□□□□ 0.36
CASC4Q6P4E1 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CASC4Q6P4E1 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.3■□□□□ 0.36
CASC4Q6P4E1 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CASC4Q6P4E1 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CASC4Q6P4E1 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CASC4Q6P4E1 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CASC4Q6P4E1 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.3■□□□□ 0.36
CASC4Q6P4E1 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CASC4Q6P4E1 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.3■□□□□ 0.36
CASC4Q6P4E1 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CASC4Q6P4E1 AC063926.3-201ENST00000624734 5658 ntBASIC17.3■□□□□ 0.36
CASC4Q6P4E1 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CASC4Q6P4E1 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CASC4Q6P4E1 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.29■□□□□ 0.36
CASC4Q6P4E1 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CASC4Q6P4E1 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CASC4Q6P4E1 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CASC4Q6P4E1 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CASC4Q6P4E1 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CASC4Q6P4E1 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.29■□□□□ 0.36
CASC4Q6P4E1 TUBB8P12-201ENST00000308911 1335 ntBASIC17.29■□□□□ 0.36
CASC4Q6P4E1 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CASC4Q6P4E1 TUBB7P-202ENST00000428444 1305 ntBASIC17.29■□□□□ 0.36
CASC4Q6P4E1 TUBB8P7-204ENST00000567960 1332 ntBASIC17.29■□□□□ 0.36
CASC4Q6P4E1 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.29■□□□□ 0.36
CASC4Q6P4E1 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CASC4Q6P4E1 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.29■□□□□ 0.36
CASC4Q6P4E1 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CASC4Q6P4E1 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CASC4Q6P4E1 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.29■□□□□ 0.36
CASC4Q6P4E1 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.29■□□□□ 0.36
CASC4Q6P4E1 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CASC4Q6P4E1 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CASC4Q6P4E1 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.29■□□□□ 0.36
CASC4Q6P4E1 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CASC4Q6P4E1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CASC4Q6P4E1 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CASC4Q6P4E1 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CASC4Q6P4E1 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.29■□□□□ 0.36
CASC4Q6P4E1 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CASC4Q6P4E1 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.29■□□□□ 0.36
CASC4Q6P4E1 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CASC4Q6P4E1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.29■□□□□ 0.36
CASC4Q6P4E1 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
CASC4Q6P4E1 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.29■□□□□ 0.36
CASC4Q6P4E1 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CASC4Q6P4E1 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CASC4Q6P4E1 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 268.4 ms