Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 HMGA1P7-201ENST00000406908 502 ntBASIC17.55■□□□□ 0.4
TRNP1Q6NT89 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 AC096734.2-201ENST00000562054 433 ntBASIC17.55■□□□□ 0.4
TRNP1Q6NT89 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 AL671883.3-201ENST00000603274 991 ntBASIC17.55■□□□□ 0.4
TRNP1Q6NT89 AL139011.1-202ENST00000642063 584 ntBASIC17.55■□□□□ 0.4
TRNP1Q6NT89 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 ALOX12P2-203ENST00000570921 1945 ntBASIC17.55■□□□□ 0.4
TRNP1Q6NT89 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRNP1Q6NT89 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 AC140113.2-201ENST00000604370 208 ntBASIC17.54■□□□□ 0.4
TRNP1Q6NT89 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.54■□□□□ 0.4
TRNP1Q6NT89 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRNP1Q6NT89 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRNP1Q6NT89 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRNP1Q6NT89 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
TRNP1Q6NT89 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRNP1Q6NT89 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.53■□□□□ 0.4
TRNP1Q6NT89 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRNP1Q6NT89 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRNP1Q6NT89 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TRNP1Q6NT89 AC005052.1-201ENST00000625181 2492 ntBASIC17.53■□□□□ 0.4
TRNP1Q6NT89 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRNP1Q6NT89 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRNP1Q6NT89 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TRNP1Q6NT89 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.53■□□□□ 0.4
TRNP1Q6NT89 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.53■□□□□ 0.4
TRNP1Q6NT89 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.53■□□□□ 0.4
TRNP1Q6NT89 AL513480.1-201ENST00000451731 511 ntBASIC17.53■□□□□ 0.4
TRNP1Q6NT89 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.53■□□□□ 0.4
TRNP1Q6NT89 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.53■□□□□ 0.4
TRNP1Q6NT89 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.53■□□□□ 0.4
TRNP1Q6NT89 AC087641.1-201ENST00000557561 1021 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms