Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM35AQ53FP2 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.08■□□□□ 0.16
TMEM35AQ53FP2 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.08■□□□□ 0.16
TMEM35AQ53FP2 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.08■□□□□ 0.16
TMEM35AQ53FP2 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM35AQ53FP2 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.08■□□□□ 0.16
TMEM35AQ53FP2 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM35AQ53FP2 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.08■□□□□ 0.16
TMEM35AQ53FP2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM35AQ53FP2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TMEM35AQ53FP2 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.08■□□□□ 0.16
TMEM35AQ53FP2 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM35AQ53FP2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.08■□□□□ 0.16
TMEM35AQ53FP2 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 HCG4-201ENST00000418983 998 ntBASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 UNC93B6-202ENST00000528242 690 ntBASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 AP001350.2-201ENST00000625104 1094 ntBASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM35AQ53FP2 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 RNF216P1-203ENST00000404404 2427 ntBASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 AC131009.4-201ENST00000624048 1740 ntBASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 AC009947.1-201ENST00000444350 727 ntBASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 FDX1P1-201ENST00000449115 551 ntBASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 RNA5SP415-201ENST00000517246 115 ntBASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 OR7E47P-204ENST00000575924 449 ntBASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 MIR4751-201ENST00000578027 74 ntBASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM35AQ53FP2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.05■□□□□ 0.16
TMEM35AQ53FP2 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM35AQ53FP2 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TMEM35AQ53FP2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM35AQ53FP2 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM35AQ53FP2 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM35AQ53FP2 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms