Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX1P83916 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX1P83916 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX1P83916 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CBX1P83916 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CBX1P83916 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX1P83916 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CBX1P83916 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC17.71■□□□□ 0.43
CBX1P83916 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
CBX1P83916 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX1P83916 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
CBX1P83916 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.71■□□□□ 0.43
CBX1P83916 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX1P83916 AL645728.1-201ENST00000366221 2101 ntBASIC17.71■□□□□ 0.42
CBX1P83916 AL109954.1-202ENST00000564051 2148 ntBASIC17.71■□□□□ 0.42
CBX1P83916 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CBX1P83916 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC17.71■□□□□ 0.42
CBX1P83916 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.71■□□□□ 0.42
CBX1P83916 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
CBX1P83916 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.7■□□□□ 0.42
CBX1P83916 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CBX1P83916 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC17.7■□□□□ 0.42
CBX1P83916 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
CBX1P83916 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
CBX1P83916 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX1P83916 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.7■□□□□ 0.42
CBX1P83916 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX1P83916 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX1P83916 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CBX1P83916 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CBX1P83916 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CBX1P83916 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CBX1P83916 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
CBX1P83916 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.7■□□□□ 0.42
CBX1P83916 MIR638-201ENST00000385237 100 ntBASIC17.7■□□□□ 0.42
CBX1P83916 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.7■□□□□ 0.42
CBX1P83916 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CBX1P83916 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CBX1P83916 DDX43P3-201ENST00000441064 443 ntBASIC17.7■□□□□ 0.42
CBX1P83916 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CBX1P83916 AC137761.2-201ENST00000561729 223 ntBASIC17.7■□□□□ 0.42
CBX1P83916 RARRES2P10-201ENST00000564312 460 ntBASIC17.7■□□□□ 0.42
CBX1P83916 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.7■□□□□ 0.42
CBX1P83916 AC145350.3-201ENST00000569033 163 ntBASIC17.7■□□□□ 0.42
CBX1P83916 RAP2CP1-201ENST00000605103 478 ntBASIC17.7■□□□□ 0.42
CBX1P83916 OR10C1-204ENST00000622521 1039 ntBASIC17.7■□□□□ 0.42
CBX1P83916 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.7■□□□□ 0.42
CBX1P83916 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CBX1P83916 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX1P83916 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CBX1P83916 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CBX1P83916 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX1P83916 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.7■□□□□ 0.42
CBX1P83916 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX1P83916 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CBX1P83916 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CBX1P83916 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CBX1P83916 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX1P83916 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CBX1P83916 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.7■□□□□ 0.42
CBX1P83916 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX1P83916 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.7■□□□□ 0.42
CBX1P83916 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.7■□□□□ 0.42
CBX1P83916 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CBX1P83916 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.69■□□□□ 0.42
CBX1P83916 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.69■□□□□ 0.42
CBX1P83916 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CBX1P83916 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX1P83916 COL6A4P2-202ENST00000504443 2753 ntBASIC17.69■□□□□ 0.42
CBX1P83916 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.69■□□□□ 0.42
CBX1P83916 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX1P83916 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX1P83916 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX1P83916 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.69■□□□□ 0.42
CBX1P83916 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.69■□□□□ 0.42
CBX1P83916 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.69■□□□□ 0.42
CBX1P83916 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX1P83916 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CBX1P83916 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CBX1P83916 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX1P83916 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX1P83916 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CBX1P83916 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.69■□□□□ 0.42
CBX1P83916 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX1P83916 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.69■□□□□ 0.42
CBX1P83916 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
CBX1P83916 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.69■□□□□ 0.42
CBX1P83916 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.69■□□□□ 0.42
CBX1P83916 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX1P83916 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX1P83916 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.69■□□□□ 0.42
CBX1P83916 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CBX1P83916 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX1P83916 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX1P83916 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX1P83916 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CBX1P83916 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CBX1P83916 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX1P83916 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX1P83916 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms