Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 MIR4492-201ENST00000581627 80 ntBASIC14.8□□□□□ -0.04
HIST1H3AP68431 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.8□□□□□ -0.04
HIST1H3AP68431 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.8□□□□□ -0.04
HIST1H3AP68431 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.8□□□□□ -0.04
HIST1H3AP68431 AL691432.3-201ENST00000621860 400 ntBASIC14.8□□□□□ -0.04
HIST1H3AP68431 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.8□□□□□ -0.04
HIST1H3AP68431 AC008735.5-201ENST00000623544 497 ntBASIC14.8□□□□□ -0.04
HIST1H3AP68431 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.8□□□□□ -0.04
HIST1H3AP68431 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H3AP68431 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.8□□□□□ -0.04
HIST1H3AP68431 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.8□□□□□ -0.04
HIST1H3AP68431 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H3AP68431 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H3AP68431 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H3AP68431 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H3AP68431 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H3AP68431 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.8□□□□□ -0.04
HIST1H3AP68431 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H3AP68431 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H3AP68431 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H3AP68431 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.8□□□□□ -0.04
HIST1H3AP68431 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
HIST1H3AP68431 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H3AP68431 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H3AP68431 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.8□□□□□ -0.04
HIST1H3AP68431 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.8□□□□□ -0.04
HIST1H3AP68431 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HIST1H3AP68431 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST1H3AP68431 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HIST1H3AP68431 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST1H3AP68431 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
HIST1H3AP68431 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST1H3AP68431 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
HIST1H3AP68431 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST1H3AP68431 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
HIST1H3AP68431 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.79□□□□□ -0.04
HIST1H3AP68431 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
HIST1H3AP68431 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.79□□□□□ -0.04
HIST1H3AP68431 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.79□□□□□ -0.04
HIST1H3AP68431 KRT18P67-201ENST00000432816 1264 ntBASIC14.79□□□□□ -0.04
HIST1H3AP68431 HNRNPDP1-201ENST00000439535 754 ntBASIC14.79□□□□□ -0.04
HIST1H3AP68431 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.79□□□□□ -0.04
HIST1H3AP68431 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HIST1H3AP68431 AC136632.2-201ENST00000512891 861 ntBASIC14.79□□□□□ -0.04
HIST1H3AP68431 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
HIST1H3AP68431 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.79□□□□□ -0.04
HIST1H3AP68431 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.79□□□□□ -0.04
HIST1H3AP68431 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.79□□□□□ -0.04
HIST1H3AP68431 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HIST1H3AP68431 GGTLC5P-201ENST00000617623 998 ntBASIC14.79□□□□□ -0.04
HIST1H3AP68431 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
HIST1H3AP68431 NFIC-211ENST00000641145 8399 ntBASIC14.79□□□□□ -0.04
HIST1H3AP68431 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST1H3AP68431 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST1H3AP68431 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HIST1H3AP68431 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H3AP68431 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H3AP68431 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H3AP68431 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H3AP68431 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HIST1H3AP68431 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.78□□□□□ -0.04
HIST1H3AP68431 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.78□□□□□ -0.04
HIST1H3AP68431 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.78□□□□□ -0.04
HIST1H3AP68431 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HIST1H3AP68431 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H3AP68431 AC006538.1-201ENST00000567905 1585 ntBASIC14.78□□□□□ -0.04
HIST1H3AP68431 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HIST1H3AP68431 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H3AP68431 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H3AP68431 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.78□□□□□ -0.04
HIST1H3AP68431 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H3AP68431 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.78□□□□□ -0.04
HIST1H3AP68431 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H3AP68431 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H3AP68431 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HIST1H3AP68431 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
HIST1H3AP68431 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.78□□□□□ -0.04
HIST1H3AP68431 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.78□□□□□ -0.04
HIST1H3AP68431 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.78□□□□□ -0.04
HIST1H3AP68431 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H3AP68431 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.78□□□□□ -0.04
HIST1H3AP68431 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.78□□□□□ -0.04
HIST1H3AP68431 AC091167.2-201ENST00000579581 588 ntBASIC14.78□□□□□ -0.04
HIST1H3AP68431 AC008667.4-201ENST00000607370 168 ntBASIC14.78□□□□□ -0.04
HIST1H3AP68431 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.78□□□□□ -0.04
HIST1H3AP68431 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.78□□□□□ -0.04
HIST1H3AP68431 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HIST1H3AP68431 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H3AP68431 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HIST1H3AP68431 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HIST1H3AP68431 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H3AP68431 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H3AP68431 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H3AP68431 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H3AP68431 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H3AP68431 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H3AP68431 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H3AP68431 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H3AP68431 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HIST1H3AP68431 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms